Gene EcDH1_3952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3952 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4258004 
End bp4260427 
Gene Length2424 bp 
Protein Length807 aa 
Translation table11 
GC content55% 
IMG OID 
ProductGlycerol-3-phosphate O-acyltransferase 
Protein accessionACX41552 
Protein GI260451130 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGGCT GGCCACGAAT TTACTACAAA TTACTGAATT TACCATTAAG CATCCTGGTA 
AAAAGCAAGT CTATTCCGGC AGATCCTGCC CCGGAACTGG GGCTGGATAC CTCTCGTCCA
ATTATGTACG TTTTACCGTA CAACTCGAAA GCAGATTTGC TGACGTTGCG CGCCCAGTGT
CTGGCACATG ACTTGCCTGA CCCGTTAGAG CCGCTGGAAA TCGACGGCAC GCTACTGCCG
CGCTATGTGT TCATTCACGG CGGGCCGCGT GTGTTCACCT ATTACACGCC GAAAGAAGAG
TCTATTAAGC TGTTCCACGA CTATCTCGAT TTGCACCGTA GCAACCCAAA TCTGGATGTG
CAGATGGTGC CAGTGTCGGT GATGTTTGGT CGCGCGCCGG GGCGTGAAAA AGGCGAAGTG
AACCCGCCGC TGCGTATGCT TAACGGCGTA CAGAAATTTT TCGCTGTACT GTGGCTCGGT
CGCGACAGTT TTGTGCGTTT CTCGCCGTCA GTTTCGCTGC GCCGTATGGC GGATGAACAC
GGCACGGATA AAACTATCGC TCAGAAACTG GCGCGCGTGG CGCGTATGCA CTTTGCCCGT
CAACGTCTGG CTGCCGTAGG CCCACGTTTG CCTGCTCGTC AGGATCTGTT TAATAAGCTG
CTCGCCTCCC GCGCCATTGC CAAAGCGGTA GAAGATGAAG CGCGCAGCAA AAAAATCTCC
CATGAAAAAG CGCAGCAGAA CGCGATTGCA CTGATGGAAG AGATTGCGGC GAATTTCTCT
TACGAGATGA TTCGCCTGAC TGACCGTATT CTGGGCTTCA CCTGGAACCG ACTTTACCAG
GGCATCAACG TCCATAACGC TGAGCGCGTT CGCCAGCTGG CCCACGACGG TCATGAGCTG
GTATATGTGC CTTGCCACCG CAGTCACATG GACTACCTGC TGCTTTCTTA CGTGCTGTAT
CACCAGGGGC TGGTGCCGCC GCATATCGCC GCCGGGATCA ACCTGAATTT CTGGCCTGCC
GGGCCGATTT TCCGCCGTCT GGGGGCGTTC TTTATTCGCC GTACGTTTAA AGGCAATAAA
CTTTATTCCA CCGTTTTCCG GGAGTATCTC GGCGAACTGT TCAGCCGTGG TTATTCCGTC
GAGTACTTCG TGGAAGGCGG TCGTTCCCGT ACGGGGCGTT TGCTGGATCC GAAAACTGGT
ACGCTGTCGA TGACCATTCA GGCGATGCTG CGTGGCGGCA CGCGTCCGAT TACGCTGATT
CCGATCTATA TCGGTTATGA GCACGTCATG GAAGTGGGTA CTTACGCCAA AGAACTGCGC
GGCGCGACGA AAGAGAAAGA GAGCCTGCCG CAGATGCTGC GCGGTTTAAG CAAGCTGCGT
AATCTCGGTC AGGGTTACGT CAACTTCGGT GAACCAATGC CGTTGATGAC CTACCTTAAC
CAGCATGTAC CTGACTGGCG TGAATCTATC GATCCCATCG AAGCGGTGCG TCCGGCATGG
TTAACGCCGA CGGTCAATAA TATTGCTGCC GATCTGATGG TACGCATTAA CAACGCAGGC
GCGGCAAACG CCATGAACCT GTGCTGTACT GCGCTACTGG CATCACGTCA GCGCTCACTC
ACCCGCGAGC AGTTAACCGA GCAACTCAAC TGCTACCTGG ATCTGATGCG CAACGTGCCC
TACTCCACGG ACTCTACCGT TCCTTCAGCC AGCGCCAGCG AGCTTATCGA TCACGCGCTG
CAAATGAACA AGTTTGAAGT CGAGAAAGAC ACAATCGGCG ACATCATCAT TCTGCCGCGC
GAGCAAGCGG TGCTGATGAC CTACTATCGC AACAACATTG CGCATATGTT GGTGCTGCCT
TCGCTGATGG CGGCAATCGT CACCCAGCAT CGCCACATCT CCCGCGACGT ATTGATGGAG
CACGTCAATG TGCTTTACCC AATGCTGAAA GCGGAGCTGT TCCTGCGCTG GGATCGCGAC
GAGTTGCCGG ACGTTATTGA TGCGCTGGCA AATGAGATGC AACGTCAGGG GCTGATTACC
CTGCAAGATG ATGAGTTGCA TATCAACCCG GCGCATTCTC GCACGCTACA GCTGCTGGCC
GCAGGCGCGC GCGAAACGCT GCAACGTTAT GCCATCACCT TCTGGTTGTT GAGTGCCAAC
CCGTCGATCA ACCGCGGTAC GCTGGAGAAA GAGAGCCGCA CCGTCGCGCA ACGTCTCTCC
GTGCTGCACG GCATCAACGC GCCGGAGTTC TTCGACAAGG CGGTGTTCAG TTCTCTGGTG
CTGACACTGC GTGATGAAGG GTATATCAGC GATAGCGGCG ATGCCGAACC GGCAGAAACG
ATGAAGGTTT ATCAGTTGCT GGCGGAGTTG ATTACATCAG ACGTGCGTTT GACGATTGAG
AGTGCGACGC AGGGCGAAGG GTAA
 
Protein sequence
MSGWPRIYYK LLNLPLSILV KSKSIPADPA PELGLDTSRP IMYVLPYNSK ADLLTLRAQC 
LAHDLPDPLE PLEIDGTLLP RYVFIHGGPR VFTYYTPKEE SIKLFHDYLD LHRSNPNLDV
QMVPVSVMFG RAPGREKGEV NPPLRMLNGV QKFFAVLWLG RDSFVRFSPS VSLRRMADEH
GTDKTIAQKL ARVARMHFAR QRLAAVGPRL PARQDLFNKL LASRAIAKAV EDEARSKKIS
HEKAQQNAIA LMEEIAANFS YEMIRLTDRI LGFTWNRLYQ GINVHNAERV RQLAHDGHEL
VYVPCHRSHM DYLLLSYVLY HQGLVPPHIA AGINLNFWPA GPIFRRLGAF FIRRTFKGNK
LYSTVFREYL GELFSRGYSV EYFVEGGRSR TGRLLDPKTG TLSMTIQAML RGGTRPITLI
PIYIGYEHVM EVGTYAKELR GATKEKESLP QMLRGLSKLR NLGQGYVNFG EPMPLMTYLN
QHVPDWRESI DPIEAVRPAW LTPTVNNIAA DLMVRINNAG AANAMNLCCT ALLASRQRSL
TREQLTEQLN CYLDLMRNVP YSTDSTVPSA SASELIDHAL QMNKFEVEKD TIGDIIILPR
EQAVLMTYYR NNIAHMLVLP SLMAAIVTQH RHISRDVLME HVNVLYPMLK AELFLRWDRD
ELPDVIDALA NEMQRQGLIT LQDDELHINP AHSRTLQLLA AGARETLQRY AITFWLLSAN
PSINRGTLEK ESRTVAQRLS VLHGINAPEF FDKAVFSSLV LTLRDEGYIS DSGDAEPAET
MKVYQLLAEL ITSDVRLTIE SATQGEG