Gene EcDH1_3940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3940 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4247609 
End bp4248688 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content56% 
IMG OID 
Productalanine racemase 
Protein accessionACX41540 
Protein GI260451118 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGCGG CAACTGTTGT GATTAACCGC CGCGCTCTGC GACACAACCT GCAACGTCTT 
CGTGAACTGG CCCCTGCCAG TAAAATGGTT GCGGTGGTGA AAGCGAACGC TTATGGTCAC
GGTCTTCTTG AGACCGCGCG AACGCTCCCC GATGCTGACG CCTTTGGCGT AGCCCGTCTC
GAAGAAGCTC TGCGACTGCG TGCGGGGGGA ATCACCAAAC CTGTACTGTT ACTCGAAGGC
TTTTTTGATG CCAGAGATCT GCCGACGATT TCTGCGCAAC ATTTTCATAC CGCCGTGCAT
AACGAAGAAC AGCTGGCTGC GCTGGAAGAG GCTAGCCTGG ACGAGCCGGT TACCGTCTGG
ATGAAACTCG ATACCGGTAT GCACCGTCTG GGCGTAAGGC CGGAACAGGC TGAGGCGTTT
TATCATCGCC TGACCCAGTG CAAAAACGTT CGTCAGCCGG TGAATATCGT CAGCCATTTT
GCGCGCGCGG ATGAACCAAA ATGTGGCGCA ACCGAGAAAC AACTCGCTAT CTTTAATACC
TTTTGCGAAG GCAAACCTGG TCAACGTTCC ATTGCCGCGT CGGGTGGCAT TCTGCTGTGG
CCACAGTCGC ATTTTGACTG GGTGCGCCCG GGCATCATTC TTTATGGCGT CTCGCCGCTG
GAAGATCGCT CCACCGGTGC CGATTTTGGC TGTCAGCCAG TGATGTCACT AACCTCCAGC
CTGATTGCCG TGCGTGAGCA TAAAGCCGGA GAGCCTGTTG GTTATGGTGG AACCTGGGTA
AGCGAACGTG ATACCCGTCT TGGCGTAGTC GCGATGGGCT ATGGCGATGG TTATCCGCGC
GCCGCGCCGT CCGGTACGCC AGTGCTGGTG AACGGTCGCG AAGTACCGAT TGTCGGGCGC
GTGGCGATGG ATATGATCTG CGTAGACTTA GGTCCACAGG CGCAGGACAA AGCCGGGGAT
CCGGTCATTT TATGGGGCGA AGGTTTGCCC GTAGAACGTA TCGCTGAAAT GACGAAAGTA
AGCGCTTACG AACTTATTAC GCGCCTGACT TCAAGGGTCG CGATGAAATA CGTGGATTAA
 
Protein sequence
MQAATVVINR RALRHNLQRL RELAPASKMV AVVKANAYGH GLLETARTLP DADAFGVARL 
EEALRLRAGG ITKPVLLLEG FFDARDLPTI SAQHFHTAVH NEEQLAALEE ASLDEPVTVW
MKLDTGMHRL GVRPEQAEAF YHRLTQCKNV RQPVNIVSHF ARADEPKCGA TEKQLAIFNT
FCEGKPGQRS IAASGGILLW PQSHFDWVRP GIILYGVSPL EDRSTGADFG CQPVMSLTSS
LIAVREHKAG EPVGYGGTWV SERDTRLGVV AMGYGDGYPR AAPSGTPVLV NGREVPIVGR
VAMDMICVDL GPQAQDKAGD PVILWGEGLP VERIAEMTKV SAYELITRLT SRVAMKYVD