Gene EcDH1_3928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3928 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4234642 
End bp4235991 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content56% 
IMG OID 
ProductXanthine/uracil/vitamin C permease 
Protein accessionACX41528 
Protein GI260451106 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTACGT CATCAGCGCG TACCGGCGGT TCACTCGACG CCTGGTTTAA AATTTCACAA 
CGTGGAAGCA CTGTCCGTCA GGAAGTGGTT GCCGGGTTAA CAACGTTTCT GGCGATGGTC
TACTCGGTCA TCGTCGTTCC AGGTATGTTG GGTAAAGCAG GCTTCCCGCC TGCGGCAGTT
TTCGTTGCAA CCTGTCTGGT TGCCGGACTC GGTTCTATCG TGATGGGTCT GTGGGCTAAT
CTGCCGTTGG CGATTGGTTG CGCCATCTCC CTGACAGCGT TTACCGCATT CAGCCTGGTG
CTGGGGCAAC ATATTAGCGT ACCTGTCGCG CTGGGTGCCG TGTTCCTGAT GGGTGTGCTG
TTTACGGTAA TTTCTGCCAC GGGTATCCGT AGCTGGATTT TGCGCAACTT GCCTCACGGT
GTGGCGCACG GCACGGGGAT TGGTATCGGT CTGTTCCTGC TGCTCATTGC CGCTAACGGT
GTCGGTCTGG TGATTAAAAA CCCGCTTGAT GGTCTGCCCG TTGCGCTGGG TGATTTCGCG
ACCTTCCCGG TGATTATGTC ACTGGTAGGT CTGGCGGTGA TCATCGGCCT GGAAAAACTG
AAAGTCCCTG GTGGCATTCT GCTGACCATT ATCGGTATCT CAATTGTCGG TTTGATCTTC
GATCCTAACG TCCATTTCTC CGGCGTTTTC GCCATGCCTT CATTGAGCGA TGAAAACGGC
AATTCACTGA TTGGCAGCCT GGACATTATG GGCGCGCTGA ATCCTGTAGT CCTGCCAAGC
GTTCTGGCGC TGGTGATGAC GGCAGTATTT GATGCCACCG GAACTATCCG TGCCGTCGCC
GGCCAGGCGA ACCTGCTGGA TAAAGATGGG CAGATCATCG ACGGTGGGAA AGCACTGACC
ACTGACTCCA TGAGCAGCGT TTTCTCTGGC CTGGTGGGTG CGGCTCCGGC AGCGGTATAC
ATCGAGTCTG CGGCGGGTAC GGCGGCGGGC GGTAAAACCG GTTTGACGGC TATCACCGTT
GGCGTGCTGT TCCTCCTGAT TCTGTTCCTC TCTCCGCTCT CTTACCTCGT TCCGGGGTAT
GCAACGGCTC CGGCGCTGAT GTACGTTGGC CTGCTGATGC TGAGCAACGT GGCGAAAATC
GACTTTGCTG ATTTTGTTGA TGCGATGGCG GGTCTGGTTA CGGCTGTATT CATCGTGCTG
ACCTGTAACA TCGTAACAGG CATCATGATC GGCTTCGCGA CTCTGGTGAT TGGTCGTCTG
GTTTCCGGCG AATGGCGCAA GTTGAACATC GGTACGGTCG TTATCGCCGT GGCGCTGGTG
ACCTTCTATG CGGGTGGCTG GGCTATCTAA
 
Protein sequence
MSTSSARTGG SLDAWFKISQ RGSTVRQEVV AGLTTFLAMV YSVIVVPGML GKAGFPPAAV 
FVATCLVAGL GSIVMGLWAN LPLAIGCAIS LTAFTAFSLV LGQHISVPVA LGAVFLMGVL
FTVISATGIR SWILRNLPHG VAHGTGIGIG LFLLLIAANG VGLVIKNPLD GLPVALGDFA
TFPVIMSLVG LAVIIGLEKL KVPGGILLTI IGISIVGLIF DPNVHFSGVF AMPSLSDENG
NSLIGSLDIM GALNPVVLPS VLALVMTAVF DATGTIRAVA GQANLLDKDG QIIDGGKALT
TDSMSSVFSG LVGAAPAAVY IESAAGTAAG GKTGLTAITV GVLFLLILFL SPLSYLVPGY
ATAPALMYVG LLMLSNVAKI DFADFVDAMA GLVTAVFIVL TCNIVTGIMI GFATLVIGRL
VSGEWRKLNI GTVVIAVALV TFYAGGWAI