Gene EcDH1_3927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3927 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4232841 
End bp4234490 
Gene Length1650 bp 
Protein Length549 aa 
Translation table11 
GC content56% 
IMG OID 
ProductNa+/H+ antiporter 
Protein accessionACX41527 
Protein GI260451105 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATCT TCTTCACCAT ACTGATAATG ACCCTCGTGG TCTCGCTGTC CGGGGTGGTC 
ACTCGTGTCA TGCCCTTTCA GATCCCGCTT CCGCTTATGC AAATCGCCAT CGGTGCGCTA
CTGGCGTGGC CGACGTTTGG TTTGCATGTG GAGTTTGATC CTGAACTCTT TTTAGTCTTG
TTTATCCCGC CGTTGCTGTT CGCTGATGGC TGGAAAACGC CGACCCGTGA ATTTCTCGAA
CATGGTCGAG AGATTTTCGG CCTCGCGCTG GCGCTGGTGG TGGTCACCGT GGTCGGCATT
GGCTTCCTTA TTTACTGGGT GGTGCCGGGC ATTCCGCTGA TCCCTGCCTT TGCGCTGGCG
GCGGTGCTTT CTCCGACCGA TGCTGTGGCG CTCTCCGGGA TTGTTGGCGA AGGGCGCATC
CCGAAAAAAA TCATGGGCAT TTTGCAGGGC GAAGCGTTGA TGAATGACGC CTCCGGTCTG
GTGTCGTTGA AGTTTGCCGT AGCAGTGGCG ATGGGGACGA TGATCTTCAC CGTCGGCGGT
GCGACGGTCG AATTTATGAA AGTAGCCATT GGCGGTATTC TCGCCGGTTT TGTGGTGAGC
TGGCTGTACG GTCGCTCGCT GCGATTCCTC AGCCGCTGGG GCGGTGATGA ACCCGCGACG
CAGATCGTCC TGCTGTTCCT GCTGCCATTC GCTTCTTATC TGATTGCCGA ACATATTGGC
GTTTCCGGCA TCCTCGCTGC GGTTGCCGCC GGGATGACCA TCACCCGCTC CGGTGTGATG
CGCCGTGCGC CGCTGGCAAT GCGCCTGCGT GCAAACAGCA CCTGGGCGAT GCTGGAATTT
GTCTTTAACG GCATGGTGTT CCTGCTGTTA GGTCTGCAGC TGCCGGGTAT TCTGGAGACG
TCGCTGATGG CAGCAGAAAT CGACCCTAAC GTCGAAATCT GGATGCTGTT TACCAATATT
ATTCTGATAT ATGCGGCGCT GATGCTGGTC CGTTTCGGCT GGCTGTGGAC GATGAAAAAG
TTCAGCAACC GCTTCCTGAA GAAGAAGCCG ATGGAGTTTG GTTCGTGGAC CACACGAGAA
ATCCTGATCG CGTCTTTCGC CGGGGTGCGT GGGGCGATCA CTCTGGCCGG TGTGCTCTCT
ATCCCGCTGC TCTTGCCGGA TGGTAACGTC TTCCCGGCGC GCTATGAGCT GGTGTTCCTG
GCGGCTGGCG TCATTCTCTT CTCGCTGTTT GTCGGCGTGG TGATGTTGCC TATTCTGCTA
CAACACATTG AAGTCGCGGA TCATTCGCAA CAATTGAAAG AGGAACGTAT TGCGCGAGCG
GCAACGGCAG AAGTGGCGAT TGTGGCGATC CAGAAAATGG AGGAGCGTCT GGCGGCGGAT
ACCGAAGAGA ATATCGATAA CCAGCTGCTT ACGGAGGTCA GTTCTCGCGT CATTGGTAAC
CTGCGTCGTC GCGCCGATGG ACGTAACGAC GTTGAAAGTT CCGTGCAGGA AGAGAACCTT
GAGCGTCGCT TCCGTCTGGC GGCATTGCGT TCTGAACGTG CTGAACTTTA CCACCTGCGC
GCCACACGGG AGATCAGCAA CGAAACGCTG CAAAAATTAC TGCACGATCT CGATTTGCTT
GAAGCGTTGC TAATTGAGGA AAATCAGTAA
 
Protein sequence
MEIFFTILIM TLVVSLSGVV TRVMPFQIPL PLMQIAIGAL LAWPTFGLHV EFDPELFLVL 
FIPPLLFADG WKTPTREFLE HGREIFGLAL ALVVVTVVGI GFLIYWVVPG IPLIPAFALA
AVLSPTDAVA LSGIVGEGRI PKKIMGILQG EALMNDASGL VSLKFAVAVA MGTMIFTVGG
ATVEFMKVAI GGILAGFVVS WLYGRSLRFL SRWGGDEPAT QIVLLFLLPF ASYLIAEHIG
VSGILAAVAA GMTITRSGVM RRAPLAMRLR ANSTWAMLEF VFNGMVFLLL GLQLPGILET
SLMAAEIDPN VEIWMLFTNI ILIYAALMLV RFGWLWTMKK FSNRFLKKKP MEFGSWTTRE
ILIASFAGVR GAITLAGVLS IPLLLPDGNV FPARYELVFL AAGVILFSLF VGVVMLPILL
QHIEVADHSQ QLKEERIARA ATAEVAIVAI QKMEERLAAD TEENIDNQLL TEVSSRVIGN
LRRRADGRND VESSVQEENL ERRFRLAALR SERAELYHLR ATREISNETL QKLLHDLDLL
EALLIEENQ