Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_3919 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | - |
Start bp | 4223038 |
End bp | 4223994 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | cytochrome c nitrite reductase, NrfD subunit |
Protein accession | ACX41519 |
Protein GI | 260451097 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 55 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGCAGA CTTCCGCATT TCATTTTGAA TCGCTGGTGT GGGACTGGCC GATTGCCATC TACCTGTTTT TGATTGGTAT TTCTGCTGGT CTGGTGACGC TGGCCGTGCT GTTACGTCGC TTCTACCCGC AGGCGGGCGG TGCAGACAGT ACGTTGCTGC GCACCACGCT GATTGTCGGG CCGGGCGCGG TGATCCTCGG TCTGTTGATC CTCGTCTTCC ACCTGACAAG ACCGTGGACC TTCTGGAAGC TGATGTTCCA CTACAGTTTT ACCTCGGTGA TGTCGATGGG GGTGATGCTG TTTCAGCTCT ACATGGTGGT GCTGGTGCTG TGGCTGGCGA AAATCTTTGA ACATGATTTG CTTGCCCTGC AACAACGCTG GTTGCCGAAG CTGGGGATCG TGCAAAAGGT TCTGAGCCTG CTGACGCCCG TTCATCGCGG ACTGGAAACA TTGATGCTGG TGCTGGCGGT GTTGTTGGGG GCTTATACCG GCTTTCTGCT GTCGGCGCTG AAATCGTATC CGTTCCTCAA TAACCCGATC CTGCCGGTGC TGTTCCTCTT CTCCGGCATC TCGTCCGGTG CGGCGGTGGC GCTGATCGCC ATGGCGATAC GCCAACGCAG TAACCCGCAT TCCACGGAAG CGCAGTTTGT ACACCGTATG GAAATCCCTG TGGTATGGGG TGAAATCTTC CTGCTGGTGG CGTTTTTTGT CGGTCTGGCG CTGGGCGATG ACGGTAAAGT TCGTGCGCTG GTGGCGGCAT TAGGTGGCGG TTTCTGGACG TGGTGGTTCT GGCTTGGTGT CGCCGGGCTG GGGCTGATTG TGCCAATGCT GCTCAAACCG TGGGTCAATC GCAGTTCCGG CATTCCTGCC GTGCTGGCGG CGTGTGGGGC CAGTCTGGTC GGCGTGTTGA TGCTGCGCTT TTTCATTCTC TACGCCGGAC AGTTGACGGT GGCGTAA
|
Protein sequence | MTQTSAFHFE SLVWDWPIAI YLFLIGISAG LVTLAVLLRR FYPQAGGADS TLLRTTLIVG PGAVILGLLI LVFHLTRPWT FWKLMFHYSF TSVMSMGVML FQLYMVVLVL WLAKIFEHDL LALQQRWLPK LGIVQKVLSL LTPVHRGLET LMLVLAVLLG AYTGFLLSAL KSYPFLNNPI LPVLFLFSGI SSGAAVALIA MAIRQRSNPH STEAQFVHRM EIPVVWGEIF LLVAFFVGLA LGDDGKVRAL VAALGGGFWT WWFWLGVAGL GLIVPMLLKP WVNRSSGIPA VLAACGASLV GVLMLRFFIL YAGQLTVA
|
| |