| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_3918 |
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| Symbol | |
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| ID | 0 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli DH1 |
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| Kingdom | Bacteria |
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| Replicon accession | CP001637 |
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| Strand | - |
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| Start bp | 4221300 |
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| End bp | 4222958 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | cytochrome c-type biogenesis protein CcmF |
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| Protein accession | ACX41518 |
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| Protein GI | 260451096 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTGACCC CGTTGACGGC CTTCGCGGGA GTGCGGTTGC GCTGGCCTGC CATGATGCGA
CTCACTTGCA TCGGCATTCT GGCGCAGTTC GCGCTCCTGC TGCTCGCCTT TGGCGTACTG
ACGTATTGTT TTCTCATCAG CGATTTCTCG GTCATTTATG TCGCGCAACA TAGCTATAGC
CTGCTGTCGT GGGAACTCAA GCTGGCAGCG GTGTGGGGCG GCCATGAAGG TTCGCTGCTG
CTTTGGGTGC TGCTGCTTTC CGCCTGGAGC GCGCTGTTTG CCTGGCATTA TCGGCAGCAA
ACCGATCCGC TATTTCCGCT GACGTTAGCC GTTTTATCTC TCATGCTCGC CGCACTGCTA
CTGTTTGTGG TGCTGTGGTC CGATCCCTTC GTGCGGATAT TTCCACCAGC AATCGAAGGC
CGCGATCTCA ATCCGATGCT GCAACATCCC GGTCTTATCT TTCATCCACC GCTGCTTTAC
CTTGGCTATG GCGGTTTGAT GGTAGCGGCG AGCGTGGCGC TGGCGAGTCT ACTGCGCGGC
GAGTTTGATG GTGCCTGCGC CCGAATTTGC TGGCGCTGGG CGTTACCTGG CTGGAGTGCA
TTAACGGCGG GGATCATCCT CGGTTCCTGG TGGGCCTACT GCGAACTCGG CTGGGGCGGC
TGGTGGTTCT GGGATCCGGT GGAAAACGCC TCTTTATTAC CCTGGCTTTC TGCCACTGCG
CTGCTGCACA GTTTGTCCCT GACACGCCAG CGGGGGATTT TTTGCCACTG GTCGCTGTTG
CTGGCGATAG TTACTCTGAT GCTGTCGCTG CTGGGCACCT TAATTGTCCG TTCTGGCATT
CTGGTTTCGG TTCATGCGTT CGCGCTGGAT AACGTCCGCG CCGTGCCGTT GTTCAGCCTG
TTTGCACTGA TTAGCCTTGC GTCTCTGGCT CTGTATGGCT GGCGAGCGCG GGACGGTGGC
CCGGCGGTGC ATTTTTCGGG GTTATCGCGG GAAATGTTAA TCCTCGCTAC GCTGTTGCTG
TTTTGCGCAG TGCTACTGAT CGTGCTGGTG GGAACGCTTT ATCCGATGAT TTACGGCCTG
CTGGGCTGGG GACGCCTCTC CGTTGGCGCG CCGTATTTTA ACCGCGCGAC GTTACCGTTT
GGTCTGTTGA TGCTGGTGGT GATTGTGCTG GCGACGTTTG TCTCTGGCAA ACGCGTGCAG
CTTCCGGCGC TGGTAGCTCA TGCGGGCGTG CTGTTATTTG CCGCTGGGGT CGTGGTCTCC
AGCGTCAGCC GTCAGGAGAT CAGCCTGAAT TTACAGCCGG GTCAGCAGGT GACGCTGGCA
GGATACACCT TCCGTTTTGA GTGCCTCGAT CTACAAGCCA AAGGCAATTA CACCAGCGAA
AAAGCGATAG TGGCACTGTT TGACCATCAG CAACGCATTG GTGAACTGAC GCCGGAGCGG
CGTTTTTATG AAGCACGCCG TCAACAAATG ATGGAACCGT CAATTCGCTG GAACGGCATC
CATGACTGGT ATGCGGTCAT GGGGGAGAAA ACTGGGCCGG ATCGTTACGC TTTTCGTTTG
TATGTACAAA GCGGTGTGCG CTGGATCTGG GGGGGAGGAT TGTTGATGAT TGCGGGCGCA
TTGTTAAGCG GATGGCGGGG GAAGAAGCGC GATGAATAA
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| Protein sequence | MLTPLTAFAG VRLRWPAMMR LTCIGILAQF ALLLLAFGVL TYCFLISDFS VIYVAQHSYS
LLSWELKLAA VWGGHEGSLL LWVLLLSAWS ALFAWHYRQQ TDPLFPLTLA VLSLMLAALL
LFVVLWSDPF VRIFPPAIEG RDLNPMLQHP GLIFHPPLLY LGYGGLMVAA SVALASLLRG
EFDGACARIC WRWALPGWSA LTAGIILGSW WAYCELGWGG WWFWDPVENA SLLPWLSATA
LLHSLSLTRQ RGIFCHWSLL LAIVTLMLSL LGTLIVRSGI LVSVHAFALD NVRAVPLFSL
FALISLASLA LYGWRARDGG PAVHFSGLSR EMLILATLLL FCAVLLIVLV GTLYPMIYGL
LGWGRLSVGA PYFNRATLPF GLLMLVVIVL ATFVSGKRVQ LPALVAHAGV LLFAAGVVVS
SVSRQEISLN LQPGQQVTLA GYTFRFECLD LQAKGNYTSE KAIVALFDHQ QRIGELTPER
RFYEARRQQM MEPSIRWNGI HDWYAVMGEK TGPDRYAFRL YVQSGVRWIW GGGLLMIAGA
LLSGWRGKKR DE
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