| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_3916 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 4220331 |
|---|
| End bp | 4220927 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | ACX41516 |
|---|
| Protein GI | 260451094 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 60 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAGC CCAAAATACC GGTGAAAATG CTGACAACAC TCACGATATT GATGGTATTT
CTCTGTGTCG GCAGTTATCT GTTAAGCCCA AAATGGCAGG CGGTACGTGC GGAGTATCAG
CGTCAGCGCG ATCCGCTACA TCAGTTTGCC AGCCAGCAAA CCCCGGAAGC GCAGCTTCAG
GCATTGCAGG ATAAAATCCG CGCTAATCCA CAAAACAGCG AACAGTGGGC GTTACTGGGC
GAGTACTATC TGTGGCAAAA CGATTACAGC AATTCGTTGC TGGCGTACCG TCAGGCGTTG
CAACTACGTG GTGAGAACGC TGAACTGTAT GCGGCGCTGG CGACGGTGCT TTATTACCAG
GCCAGCCAGC ATATGACCGC CCAGACTCGC GCAATGATCG ACAAAGCCCT CGCGCTGGAC
AGTAATGAAA TCACCGCCCT GATGCTGCTG GCTTCCGATG CGTTTATGCA GGCGAACTAC
GCGCAAGCCA TCGAACTATG GCAAAAAGTG ATGGATCTCA ACTCACCGCG AGTTAACCGA
ACACAGCTGG TTGAGTCGAT TAATATGGCG AAATTGTTGC AGCGGAGATT GGATTAA
|
|---|
| Protein sequence | MKQPKIPVKM LTTLTILMVF LCVGSYLLSP KWQAVRAEYQ RQRDPLHQFA SQQTPEAQLQ
ALQDKIRANP QNSEQWALLG EYYLWQNDYS NSLLAYRQAL QLRGENAELY AALATVLYYQ
ASQHMTAQTR AMIDKALALD SNEITALMLL ASDAFMQANY AQAIELWQKV MDLNSPRVNR
TQLVESINMA KLLQRRLD
|
|---|
| |