Gene EcDH1_3915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3915 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4218676 
End bp4219989 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content53% 
IMG OID 
Productsodium:dicarboxylate symporter 
Protein accessionACX41515 
Protein GI260451093 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA TAAAATTCAG CCTGGCCTGG CAGATTCTGT TTGCTATGGT GCTGGGCATT 
CTCCTGGGAA GCTACCTGCA CTACCATAGC GACAGCCGCG ACTGGCTGGT CGTCAATTTG
CTCTCTCCGG CGGGTGATAT CTTCATCCAT CTGATTAAAA TGATTGTTGT GCCGATTGTG
ATCTCCACGC TGGTGGTGGG TATCGCGGGT GTTGGTGATG CCAAACAGCT CGGGCGTATT
GGCGCGAAAA CCATTATCTA CTTCGAGGTG ATCACCACCG TCGCCATCAT TTTGGGGATC
ACTCTGGCGA ACGTCTTCCA GCCCGGTGCC GGGGTGGATA TGTCGCAGTT GGCGACCGTC
GATATCTCGA AATATCAGAG CACTACGGAA GCGGTACAAA GCAGTTCCCA CGGCATTATG
GGCACGATTT TGTCGCTGGT GCCGACGAAC ATTGTGGCGT CGATGGCGAA AGGCGAAATG
CTGCCGATCA TCTTTTTCTC GGTGCTGTTT GGTCTGGGGC TTTCTTCCCT GCCCGCGACG
CATCGTGAAC CGCTGGTGAC CGTGTTCCGC TCCATCTCTG AAACCATGTT TAAAGTGACT
CACATGGTGA TGCGTTATGC ACCGGTGGGT GTGTTTGCGC TGATTGCGGT GACGGTGGCT
AACTTTGGTT TCTCGTCTCT GTGGCCACTG GCGAAACTGG TGCTGCTGGT GCATTTCGCC
ATTCTGTTCT TCGCGCTGGT AGTGCTGGGA ATTGTGGCGC GCCTGTGCGG GTTAAGCGTC
TGGATCCTGA TTCGTATTCT GAAAGATGAG CTGATTCTGG CGTACTCCAC TGCCAGCTCT
GAAAGCGTGC TGCCGCGAAT TATTGAGAAG ATGGAAGCCT ACGGAGCACC GGTGTCGATC
ACCAGTTTCG TGGTGCCGAC CGGTTACTCT TTTAACCTTG ATGGTTCGAC GCTGTATCAA
AGTATTGCCG CTATCTTCAT CGCGCAGTTG TATGGCATTG ACCTGTCCAT CTGGCAGGAA
ATCATTCTGG TGCTGACGCT GATGGTGACC TCGAAAGGGA TTGCTGGCGT GCCTGGCGTG
TCGTTTGTGG TGTTGCTGGC AACGCTGGGT AGCGTAGGTA TTCCGCTGGA AGGTCTGGCG
TTTATTGCTG GTGTTGACCG TATCCTCGAC ATGGCGCGTA CTGCGCTGAA CGTGGTGGGT
AATGCGCTGG CGGTGCTGGT GATTGCCAAG TGGGAACACA AATTTGACCG TAAGAAAGCG
CTGGCTTATG AGCGTGAAGT GCTGGGCAAA TTTGATAAAA CTGCGGATCA ATAA
 
Protein sequence
MKNIKFSLAW QILFAMVLGI LLGSYLHYHS DSRDWLVVNL LSPAGDIFIH LIKMIVVPIV 
ISTLVVGIAG VGDAKQLGRI GAKTIIYFEV ITTVAIILGI TLANVFQPGA GVDMSQLATV
DISKYQSTTE AVQSSSHGIM GTILSLVPTN IVASMAKGEM LPIIFFSVLF GLGLSSLPAT
HREPLVTVFR SISETMFKVT HMVMRYAPVG VFALIAVTVA NFGFSSLWPL AKLVLLVHFA
ILFFALVVLG IVARLCGLSV WILIRILKDE LILAYSTASS ESVLPRIIEK MEAYGAPVSI
TSFVVPTGYS FNLDGSTLYQ SIAAIFIAQL YGIDLSIWQE IILVLTLMVT SKGIAGVPGV
SFVVLLATLG SVGIPLEGLA FIAGVDRILD MARTALNVVG NALAVLVIAK WEHKFDRKKA
LAYEREVLGK FDKTADQ