Gene EcDH1_3908 details

Gene Information

• Locus tag: EcDH1_3908
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli DH1
• Kingdom: Bacteria
• Replicon accession: CP001637
• Strand: +
• Start bp: 4207984
• End bp: 4209969
• Gene Length: 1986 bp
• Protein Length: 661 aa
• Translation table: 11
• GC content: 53%
• Product: beta-lactamase domain protein
• Protein accession: ACX41508
• Protein GI: 260451086

Plasmid Coverage information

• Num covering plasmid clones: 52
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAACT CTCGGTTATT CCGTTTGAGC AGGATTGTTA TTGCGTTAAC TGCCGCCAGC 
GGCATGATGG TAAATACCGC TAACGCGAAA GAGGAAGCGA AAGCCGCCAC TCAATATACC 
CAACAGGTTA ATCAGAATTA CGCCAAATCA TTACCGTTTA GCGATCGTCA GGATTTTGAC 
GATGCCCAGC GTGGATTTAT CGCCCCGCTG CTGGATGAAG GTATTCTGCG TGATGCGAAC 
GGTAAAGTTT ACTACCGCGC GGACGATTAC AAATTTGATA TTAATGCCGC AGCGCCGGAA 
ACCGTAAACC CCAGCCTGTG GCGTCAGTCG CAAATCAACG GTATTTCTGG CCTGTTCAAA 
GTCACCGATA AAATGTATCA GGTGCGCGGC CAGGATATCT CTAACATTAC GTTCGTTGAG 
GGCGAGAAAG GCATTATTGT TATCGACCCG CTGGTGACGC CGCCTGCCGC AAAAGCCGCA 
CTTGACCTTT ACTTCCAGCA TCGTCCGCAA AAACCGATTG TTGCCGTTAT CTACACTCAC 
AGCCACACCG ACCACTATGG TGGCGTGAAA GGCATTATCT CTGAAGCCGA TGTTAAATCC 
GGCAAAGTTC AGGTGATTGC CCCTGCAGGC TTTATGGACG AAGCCATCAG CGAAAACGTG 
CTGGCGGGTA ACATCATGAG CCGCCGTGCG CTCTACTCTT ACGGTCTGTT ACTGCCGCAC 
AACGCGCAAG GCAATGTGGG TAATGGCCTT GGCGTGACGC TGGCAACGGG CGACCCGAGC 
ATTATTGCAC CGACGAAAAC TATCGTCAGA ACTGGCGAGA AGATGATTAT CGACGGCCTG 
GAGTTTGACT TCCTGATGAC CCCAGGTAGC GAAGCGCCAG CCGAAATGCA CTTCTATATT 
CCGGCCCTGA AAGCCCTGTG TACCGCCGAG AACGCCACGC ATACCCTGCA CAACTTCTAC 
ACTCTGCGCG GCGCGAAAAC CCGCGACACC AGCAAGTGGA CCGAGTATCT GAACGAAACG 
CTGGATATGT GGGGTAACGA CGCGGAAGTG CTGTTTATGC CGCACACCTG GCCGGTCTGG 
GGCAATAAGC ATATCAATGA TTATATTGGT AAATACCGCG ATACCATCAA GTACATTCAC 
GACCAGACCC TGCACCTGGC GAACCAGGGC TACACCATGA ATGAAATCGG CGACATGATT 
AAGCTGCCGC CTGCACTTGC CAATAACTGG GCCAGCCGCG GCTATTACGG TTCTGTCAGC 
CACAACGCCC GCGCGGTGTA TAACTTCTAT CTTGGCTATT ACGACGGTAA CCCGGCTAAC 
CTGCATCCGT ATGGTCAGGT GGAGATGGGT AAACGTTACG TGCAGGCGCT GGGCGGTTCT 
GCCCGTGTCA TCAACCTGGC GCAAGAAGCG AACAAGCAAG GTGATTACCG CTGGTCGGCA 
GAACTGCTGA AACAGGTGAT TGCCGCCAAC CCGGGTGACC AGGTCGCGAA GAATCTGCAA 
GCGAATAACT TTGAACAGCT GGGCTATCAG GCCGAGTCCG CCACATGGCG CGGTTTCTAC 
CTGACCGGCG CGAAAGAGCT GCGCGAAGGG GTGCATAAGT TCAGCCACGG CACCACCGGT 
TCCCCGGACA CCATTCGCGG GATGTCGGTC GAAATGCTGT TCGACTTTAT GGCCGTTCGC 
CTCGATAGCG CGAAAGCTGC GGGTAAAAAT ATCAGCCTGA ACTTCAATAT GAGCAACGGC 
GATAACCTCA ACCTGACGCT GAACGATAGC GTGCTTAACT ACCGGAAAAC GCTGCAACCG 
CAAGCCGACG CCTCTTTCTA CATCAGCCGT GAAGATCTGC ACGCCGTGCT GACCGGACAA 
GCCAAAATGG CGGATCTGGT AAAAGCGAAG AAAGCCAAAA TTATTGGCAA TGGCGCGAAA 
CTGGAAGAAA TTATCGCCTG TCTGGATAAT TTCGATTTGT GGGTGAATAT CGTAACCCCA 
AATTAA 

 

Protein sequence

MNNSRLFRLS RIVIALTAAS GMMVNTANAK EEAKAATQYT QQVNQNYAKS LPFSDRQDFD 
DAQRGFIAPL LDEGILRDAN GKVYYRADDY KFDINAAAPE TVNPSLWRQS QINGISGLFK 
VTDKMYQVRG QDISNITFVE GEKGIIVIDP LVTPPAAKAA LDLYFQHRPQ KPIVAVIYTH 
SHTDHYGGVK GIISEADVKS GKVQVIAPAG FMDEAISENV LAGNIMSRRA LYSYGLLLPH 
NAQGNVGNGL GVTLATGDPS IIAPTKTIVR TGEKMIIDGL EFDFLMTPGS EAPAEMHFYI 
PALKALCTAE NATHTLHNFY TLRGAKTRDT SKWTEYLNET LDMWGNDAEV LFMPHTWPVW 
GNKHINDYIG KYRDTIKYIH DQTLHLANQG YTMNEIGDMI KLPPALANNW ASRGYYGSVS 
HNARAVYNFY LGYYDGNPAN LHPYGQVEMG KRYVQALGGS ARVINLAQEA NKQGDYRWSA 
ELLKQVIAAN PGDQVAKNLQ ANNFEQLGYQ AESATWRGFY LTGAKELREG VHKFSHGTTG 
SPDTIRGMSV EMLFDFMAVR LDSAKAAGKN ISLNFNMSNG DNLNLTLNDS VLNYRKTLQP 
QADASFYISR EDLHAVLTGQ AKMADLVKAK KAKIIGNGAK LEEIIACLDN FDLWVNIVTP 
N