Gene EcDH1_3905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3905 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4205112 
End bp4206092 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content52% 
IMG OID 
ProductMonosaccharide-transporting ATPase 
Protein accessionACX41505 
Protein GI260451083 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCTTTA CCACAAGAGT AAAAAGCGAA GCGAGCGAGA AGAAACCGTT CAACTTTGCG 
CTGTTCTGGG ATAAATACGG CACCTTTTTT ATCCTGGCGA TCATCGTCGC CATCTTTGGT
TCGCTGTCAC CAGAATATTT TCTGACCACC AATAATATTA CCCAGATTTT TGTTCAAAGC
TCCGTGACGG TATTGATCGG CATGGGCGAG TTTTTCGCTA TCCTGGTCGC TGGTATCGAC
CTCTCGGTTG GCGCGATTCT GGCGCTTTCC GGTATGGTGA CCGCCAAACT GATGTTGGCA
GGTGTTGACC CGTTTCTCGC AGCGATGATT GGCGGTGTAC TGGTTGGCGG CGCACTGGGG
GCGATCAACG GCTGCCTGGT CAACTGGACG GGGCTACACC CGTTCATCAT CACCCTTGGC
ACCAACGCGA TTTTCCGTGG GATCACGCTG GTGATCTCCG ATGCCAACTC GGTATACGGC
TTCTCATTTG ACTTCGTGAA CTTCTTTGCC GCCAGCGTAA TTGGGATACC TGTCCCCGTT
ATCTTCTCAC TAATTGTCGC GCTCATCCTT TGGTTTCTGA CAACGCGTAT GCGGCTCGGG
CGCAACATCT ACGCACTGGG CGGCAACAAA AATTCGGCGT TCTATTCCGG GATTGACGTG
AAATTCCACA TCCTGGTGGT GTTTATCATC TCCGGTGTTT GTGCAGGTCT GGCAGGCGTC
GTCTCAACTG CACGACTCGG TGCCGCAGAA CCGCTTGCCG GTATGGGTTT TGAAACCTAT
GCCATTGCCA GCGCCATCAT TGGCGGCACC AGTTTCTTCG GCGGCAAGGG GCGCATTTTC
TCTGTGGTGA TTGGCGGGTT GATCATCGGC ACCATCAACA ACGGTCTGAA TATTTTGCAG
GTACAAACCT ATTACCAACT GGTGGTGATG GGCGGATTAA TTATCGCGGC TGTCGCCCTT
GACCGTCTTA TCAGTAAGTA A
 
Protein sequence
MGFTTRVKSE ASEKKPFNFA LFWDKYGTFF ILAIIVAIFG SLSPEYFLTT NNITQIFVQS 
SVTVLIGMGE FFAILVAGID LSVGAILALS GMVTAKLMLA GVDPFLAAMI GGVLVGGALG
AINGCLVNWT GLHPFIITLG TNAIFRGITL VISDANSVYG FSFDFVNFFA ASVIGIPVPV
IFSLIVALIL WFLTTRMRLG RNIYALGGNK NSAFYSGIDV KFHILVVFII SGVCAGLAGV
VSTARLGAAE PLAGMGFETY AIASAIIGGT SFFGGKGRIF SVVIGGLIIG TINNGLNILQ
VQTYYQLVVM GGLIIAAVAL DRLISK