Gene EcDH1_3881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3881 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4182577 
End bp4184079 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content50% 
IMG OID 
Productmetabolite/H+ symporter, major facilitator superfamily (MFS) 
Protein accessionACX41482 
Protein GI260451060 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAAAA GGAAAAAAGT AAAACCGATT ACCCTTCGTG ATGTCACCAT TATTGATGAC 
GGTAAACTGC GTAAAGCCAT TACCGCAGCA TCACTGGGTA ATGCAATGGA ATGGTTCGAT
TTTGGTGTTT ATGGTTTTGT TGCTTACGCA TTAGGTAAAG TTTTTTTCCC GGGGGCTGAC
CCCAGCGTGC AGATGGTTGC TGCACTTGCC ACTTTCTCCG TTCCCTTTCT GATTCGACCG
CTTGGCGGAC TCTTCTTTGG TATGTTGGGC GATAAATATG GTCGCCAGAA GATCCTCGCT
ATCACTATTG TGATTATGTC GATCAGTACG TTCTGTATTG GCTTAATACC GTCCTACGAC
ACGATTGGTA TTTGGGCACC GATTCTGCTG TTGATCTGTA AGATGGCACA AGGTTTCTCG
GTCGGCGGTG AATATACCGG GGCGTCGATA TTTGTTGCGG AATACTCCCC TGACCGTAAA
CGTGGCTTTA TGGGCAGCTG GCTGGACTTC GGTTCTATTG CCGGGTTTGT GCTGGGTGCG
GGCGTGGTGG TGTTAATTTC GACCATTGTC GGCGAAGCGA ACTTCCTCGA TTGGGGCTGG
CGTATTCCGT TCTTTATCGC TCTGCCGTTA GGGATTATCG GGCTTTACCT GCGCCATGCG
CTGGAAGAGA CTCCGGCGTT CCAGCAGCAT GTCGATAAAC TGGAACAGGG CGACCGTGAA
GGTTTGCAGG ATGGCCCGAA AGTCTCGTTT AAAGAGATTG CCACTAAATA CTGGCGCAGC
CTGTTGACAT GTATTGGTCT GGTAATTGCC ACCAACGTGA CTTACTACAT GTTGCTGACC
TATATGCCGA GTTATTTGTC GCATAACCTG CATTACTCCG AAGACCACGG GGTGCTGATT
ATTATCGCCA TTATGATCGG TATGCTGTTT GTCCAGCCGG TGATGGGCTT GCTGAGTGAC
CGTTTTGGCC GTCGTCCGTT TGTGCTACTT GGTAGTGTTG CCCTGTTTGT GTTGGCGATC
CCGGCGTTTA TTCTGATTAA CAGTAACGTC ATCGGCCTGA TTTTTGCCGG GTTACTGATG
CTGGCGGTGA TCCTTAACTG CTTTACGGGC GTTATGGCTT CTACCTTGCC AGCGATGTTC
CCGACGCATA TCCGTTACAG CGCGCTGGCG GCGGCATTTA ATATTTCGGT GCTGGTTGCC
GGTCTGACGC CAACGCTGGC GGCCTGGCTG GTCGAAAGCT CGCAGAATCT GATGATGCCT
GCCTATTACC TGATGGTAGT GGCGGTGGTT GGTTTAATCA CCGGCGTAAC CATGAAAGAG
ACGGCAAATC GTCCGTTGAA AGGTGCGACA CCGGCGGCGT CAGATATACA GGAAGCGAAG
GAAATTCTCG TCGAGCATTA CGATAATATC GAGCAGAAAA TCGATGATAT TGACCACGAG
ATTGCCGATT TGCAGGCGAA ACGTACCCGC CTGGTGCAGC AACATCCGCG AATTGATGAA
TAA
 
Protein sequence
MLKRKKVKPI TLRDVTIIDD GKLRKAITAA SLGNAMEWFD FGVYGFVAYA LGKVFFPGAD 
PSVQMVAALA TFSVPFLIRP LGGLFFGMLG DKYGRQKILA ITIVIMSIST FCIGLIPSYD
TIGIWAPILL LICKMAQGFS VGGEYTGASI FVAEYSPDRK RGFMGSWLDF GSIAGFVLGA
GVVVLISTIV GEANFLDWGW RIPFFIALPL GIIGLYLRHA LEETPAFQQH VDKLEQGDRE
GLQDGPKVSF KEIATKYWRS LLTCIGLVIA TNVTYYMLLT YMPSYLSHNL HYSEDHGVLI
IIAIMIGMLF VQPVMGLLSD RFGRRPFVLL GSVALFVLAI PAFILINSNV IGLIFAGLLM
LAVILNCFTG VMASTLPAMF PTHIRYSALA AAFNISVLVA GLTPTLAAWL VESSQNLMMP
AYYLMVVAVV GLITGVTMKE TANRPLKGAT PAASDIQEAK EILVEHYDNI EQKIDDIDHE
IADLQAKRTR LVQQHPRIDE