| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_3874 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 4172953 |
|---|
| End bp | 4173861 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | ACX41475 |
|---|
| Protein GI | 260451053 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATACAG ATACGTTTAT GTGCAGCAGC GACGAAAAAC AGACCCGCAG CCCGCTGTCG
CTGTATTCGG AATACCAGCG GATGGAGATT GAGTTTCGCG CACCGCATAT CATGCCCACC
AGCCACTGGC ATGGTCAGGT CGAAGTGAAT GTGCCTTTCG ATGGCGATGT GGAATACCTG
ATCAACAATG AAAAAGTGAA TATCAATCAG GGTCATATCA CGCTGTTCTG GGCCTGTACA
CCGCACCAAC TAACAGATAC CGGAACCTGT CAGAGCATGG CGATTTTTAA TCTGCCGATG
CATCTGTTTC TCTCCTGGCC GCTGGATAAA GACCTGATTA ACCACGTCAC TCACGGCATG
GTGATCAAAT CACTGGCCAC ACAGCAACTT AGCCCGTTTG AAGTGCGCCG CTGGCAGCAG
GAATTAAACA GTCCGAACGA GCAAATTCGC CAGCTCGCCA TTGATGAAAT TGGCCTGATG
CTCAAGCGAT TTAGCCTCTC TGGCTGGGAA CCGATTCTGG TCAATAAAAC CTCGCGCACA
CACAAAAACA GCGTCTCGCG CCATGCGCAA TTTTATGTTA GCCAGATGCT GGGCTTTATT
GCCGAAAACT ATGATCAGGC GCTGACCATC AACGATGTGG CTGAGCACGT CAAACTTAAC
GCCAACTATG CAATGGGGAT ATTCCAGCGG GTCATGCAAT TGACGATGAA ACAGTACATT
ACCGCGATGC GCATCAACCA CGTTCGCGCG TTACTGAGCG ATACCGATAA AAGTATTCTC
GATATTGCCC TGACGGCAGG CTTTCGTTCA AGTAGTCGTT TTTACAGCAC GTTCGGCAAA
TATGTCGGCA TGTCGCCGCA ACAATACCGC AAACTTAGCC AACAGCGCCG CCAGACGTTT
CCCGGCTAA
|
|---|
| Protein sequence | MNTDTFMCSS DEKQTRSPLS LYSEYQRMEI EFRAPHIMPT SHWHGQVEVN VPFDGDVEYL
INNEKVNINQ GHITLFWACT PHQLTDTGTC QSMAIFNLPM HLFLSWPLDK DLINHVTHGM
VIKSLATQQL SPFEVRRWQQ ELNSPNEQIR QLAIDEIGLM LKRFSLSGWE PILVNKTSRT
HKNSVSRHAQ FYVSQMLGFI AENYDQALTI NDVAEHVKLN ANYAMGIFQR VMQLTMKQYI
TAMRINHVRA LLSDTDKSIL DIALTAGFRS SSRFYSTFGK YVGMSPQQYR KLSQQRRQTF
PG
|
|---|
| |