Gene EcDH1_3862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3862 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4159864 
End bp4161381 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content47% 
IMG OID 
Productlysyl-tRNA synthetase 
Protein accessionACX41463 
Protein GI260451041 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAAC AAGAAACACG GGGAGCCAAT GAGGCTATTG ATTTTAACGA TGAACTGAGA 
AATCGCCGCG AAAAACTGGC GGCACTACGT CAGCAAGGTG TGGCGTTTCC CAATGATTTT
CGCCGCGACC ATACCTCTGA CCAGTTGCAC GAAGAGTTTG ATGCGAAGGA TAACCAGGAA
CTGGAATCCT TAAACATTGA AGTCTCGGTT GCTGGCCGAA TGATGACCCG TCGTATCATG
GGGAAAGCCT CCTTTGTAAC GTTGCAGGAT GTCGGTGGCC GTATTCAACT GTACGTTGCA
AGAGATAGCC TGCCAGAAGG TGTTTATAAC GATCAGTTTA AAAAATGGGA TCTGGGTGAC
ATTATCGGTG CCCGCGGTAC GCTGTTTAAG ACGCAAACGG GTGAGCTTTC CATTCACTGT
ACTGAGCTGC GCCTGCTGAC TAAAGCACTA CGTCCTTTAC CAGATAAATT CCATGGTCTG
CAGGATCAGG AAGTCCGTTA TCGTCAACGT TATCTGGACC TCATCGCTAA CGATAAATCC
CGTCAAACGT TTGTTGTCCG TTCAAAAATT CTGGCCGCTA TCCGTCAATT CATGGTCGCG
CGCGGCTTTA TGGAAGTAGA AACCCCGATG ATGCAGGTAA TTCCAGGTGG GGCATCTGCT
CGCCCGTTTA TTACCCATCA TAATGCTCTG GATTTAGATA TGTATCTGCG TATCGCGCCG
GAGCTGTATC TGAAACGTCT GGTTGTAGGC GGTTTTGAAC GGGTATTCGA AATCAACCGT
AACTTCCGTA ATGAAGGTAT TTCTGTTCGC CATAATCCTG AGTTCACAAT GATGGAACTC
TACATGGCGT ATGCGGATTA CCACGATTTG ATTGAACTGA CAGAGTCACT GTTCCGCACC
CTGGCACAAG AGGTTCTGGG TACCACTAAA GTCACTTATG GCGAGCATGT GTTTGATTTC
GGCAAACCGT TTGAAAAACT CACCATGCGC GAAGCAATCA AAAAATATCG TCCAGAAACC
GATATGGCCG ACCTGGATAA TTTTGATGCT GCTAAAGCAT TAGCTGAATC TATCGGTATT
ACGGTAGAGA AAAGCTGGGG GTTGGGACGT ATTGTCACAG AGATCTTTGA TGAAGTGGCA
GAAGCACATC TGATTCAGCC AACCTTTATT ACGGAATATC CGGCAGAAGT GTCCCCGCTG
GCACGCCGTA ATGATGTTAA CCCGGAAATC ACCGACCGTT TTGAATTCTT CATCGGTGGT
CGTGAAATCG GTAATGGTTT TAGCGAATTA AACGACGCAG AAGATCAGGC TGAACGTTTC
CAGGAACAGG TTAATGCTAA AGCTGCAGGT GACGACGAAG CCATGTTCTA TGACGAAGAT
TACGTGACTG CGCTGGAATA TGGTCTGCCG CCAACCGCTG GTCTGGGTAT TGGTATCGAC
CGAATGATTA TGCTGTTTAC TAACAGCCAT ACTATTCGCG ACGTTATTCT CTTCCCGGCG
ATGCGCCCAC AGAAATAA
 
Protein sequence
MSEQETRGAN EAIDFNDELR NRREKLAALR QQGVAFPNDF RRDHTSDQLH EEFDAKDNQE 
LESLNIEVSV AGRMMTRRIM GKASFVTLQD VGGRIQLYVA RDSLPEGVYN DQFKKWDLGD
IIGARGTLFK TQTGELSIHC TELRLLTKAL RPLPDKFHGL QDQEVRYRQR YLDLIANDKS
RQTFVVRSKI LAAIRQFMVA RGFMEVETPM MQVIPGGASA RPFITHHNAL DLDMYLRIAP
ELYLKRLVVG GFERVFEINR NFRNEGISVR HNPEFTMMEL YMAYADYHDL IELTESLFRT
LAQEVLGTTK VTYGEHVFDF GKPFEKLTMR EAIKKYRPET DMADLDNFDA AKALAESIGI
TVEKSWGLGR IVTEIFDEVA EAHLIQPTFI TEYPAEVSPL ARRNDVNPEI TDRFEFFIGG
REIGNGFSEL NDAEDQAERF QEQVNAKAAG DDEAMFYDED YVTALEYGLP PTAGLGIGID
RMIMLFTNSH TIRDVILFPA MRPQK