Gene EcDH1_3842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3842 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4137389 
End bp4137856 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content52% 
IMG OID 
Productsmall multidrug resistance protein 
Protein accessionACX41444 
Protein GI260451022 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGTTTG TTTTTTCTGC GATAGTCACA AAGGTAATAG TTGAAATTCC CCTGCCACCT 
GGCAAAATAT CCGTTCAACC ATCAGCTTTG CAGGACGACC TGCAAACGCC TCTTTTCACC
GGGGACGGCC CCAATTCTCC GGAGCCTGAT ATGTCCTGGA TTATCTTAGT TATTGCTGGT
CTGCTGGAAG TGGTATGGGC CGTTGGCCTG AAATATACCC ACGGCTTTAG TCGTTTGACG
CCGAGTGTTA TTACTGTGAC GGCGATGATT GTCAGTATGG CGCTACTTGC CTGGGCGATG
AAATCGTTAC CAGTAGGGAC GGCTTATGCC GTGTGGACGG GTATTGGCGC AGTCGGCGCG
GCCATAACCG GCATTGTGCT GCTCGGTGAG TCCGCTAACC CGATGCGCCT GGCGAGTCTG
GCGTTAATCG TATTGGGGAT TATTGGTCTG AAACTCAGCA CTCACTAA
 
Protein sequence
MPFVFSAIVT KVIVEIPLPP GKISVQPSAL QDDLQTPLFT GDGPNSPEPD MSWIILVIAG 
LLEVVWAVGL KYTHGFSRLT PSVITVTAMI VSMALLAWAM KSLPVGTAYA VWTGIGAVGA
AITGIVLLGE SANPMRLASL ALIVLGIIGL KLSTH