Gene EcDH1_3765 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3765 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4061245 
End bp4062747 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content55% 
IMG OID 
ProductABC transporter related protein 
Protein accessionACX41370 
Protein GI260450948 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACCG ACCAACACCA GGAGATCCTC CGCACCGAAG GATTAAGTAA ATTTTTCCCC 
GGCGTCAAAG CGTTAGACAA CGTTGATTTC AGCCTGCGCC GTGGCGAAAT CATGGCGCTG
CTCGGTGAAA ACGGGGCGGG AAAATCAACG CTAATCAAAG CATTAACTGG TGTATACCAC
GCCGATCGCG GCACCATCTG GCTGGAAGGC CAGGCTATCT CATCGAAAAA TACCGCCCAC
GCGCAACAAC TCGGCATTGG CACCGTCTAT CAGGAAGTCA ACCTGCTACC CAATATGTCG
GTCGCTGATA ATCTATTTAT AGGCCGCGAA CCCAAACGCT TCGGCCTTCT ACGCCGCAAA
GAGATGGAAA AGCGCGCCAC CGAACTGATG GCATCTTACG GTTTCTCCCT CGACGTGCGC
GAACCGCTCA ACCGCTTTTC AGTCGCGATG CAGCAAATCG TCGCTATTTG TCGGGCTATC
GATCTCTCTG CCAAAGTGCT GATCCTCGAT GAACCCACCG CCAGTCTCGA CACCCAGGAA
GTGGAGTTAC TGTTTGACCT GATGCGTCAG TTGCGCGATC GCGGCGTCAG CCTGATTTTT
GTCACTCACT TTCTCGATCA GGTCTATCAG GTCAGCGATC GGATCACCGT CTTACGCAAC
GGCAGTTTCG TAGGCTGTCG GGAAACGTGC GAGCTACCGC AGATCGAACT GGTAAAAATG
ATGCTGGGGC GCGAGCTGGA TACCCACGCG CTACAGCGTG CCGGGCGAAC ATTGTTGAGC
GACAAACCCG TTGCCGCGTT CAAAAATTAC GGCAAAAAAG GAACGATCGC ACCGTTTGAT
CTCGAAGTAC GCCCCGGCGA GATCGTCGGT CTGGCTGGAT TGCTGGGATC AGGACGTACC
GAAACCGCCG AAGTGATCTT CGGTATCAAA CCTGCTGACA GCGGCACGGC GTTGATCAAA
GGCAAACCGC AAAACCTGCG ATCGCCACAT CAGGCTTCGG TACTGGGCAT TGGCTTCTGC
CCGGAAGACA GGAAAACCGA TGGCATCATC GCTGCCGCCT CGGTGCGGGA AAATATCATC
CTCGCTCTCC AGGCCCAGCG CGGCTGGCTA CGTCCCATTT CCCGCAAAGA ACAGCAAGAG
ATTGCCGAAC GCTTTATCCG CCAGCTTGGC ATTCGCACAC CTTCAACTGA ACAACCGATT
GAATTTCTCT CCGGCGGCAA TCAGCAAAAA GTGTTGCTTT CACGTTGGCT ACTGACCCGA
CCGCAATTTC TGATCCTCGA TGAGCCAACC CGCGGCATTG ATGTTGGTGC CCACGCCGAG
ATCATCCGCC TGATTGAAAC GCTATGCGCC GATGGTCTGG CGCTGCTGGT GATCTCCTCC
GAACTGGAAG AGCTGGTGGG CTATGCCGAT CGGGTGATTA TCATGCGCGA TCGCAAACAG
GTGGCGGAGA TCCCGCTGGC AGAGCTTTCC GTTCCGGCGA TCATGAACGC CATTGCGGCG
TAA
 
Protein sequence
MTTDQHQEIL RTEGLSKFFP GVKALDNVDF SLRRGEIMAL LGENGAGKST LIKALTGVYH 
ADRGTIWLEG QAISSKNTAH AQQLGIGTVY QEVNLLPNMS VADNLFIGRE PKRFGLLRRK
EMEKRATELM ASYGFSLDVR EPLNRFSVAM QQIVAICRAI DLSAKVLILD EPTASLDTQE
VELLFDLMRQ LRDRGVSLIF VTHFLDQVYQ VSDRITVLRN GSFVGCRETC ELPQIELVKM
MLGRELDTHA LQRAGRTLLS DKPVAAFKNY GKKGTIAPFD LEVRPGEIVG LAGLLGSGRT
ETAEVIFGIK PADSGTALIK GKPQNLRSPH QASVLGIGFC PEDRKTDGII AAASVRENII
LALQAQRGWL RPISRKEQQE IAERFIRQLG IRTPSTEQPI EFLSGGNQQK VLLSRWLLTR
PQFLILDEPT RGIDVGAHAE IIRLIETLCA DGLALLVISS ELEELVGYAD RVIIMRDRKQ
VAEIPLAELS VPAIMNAIAA