Gene EcDH1_3754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3754 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4047625 
End bp4049046 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content54% 
IMG OID 
ProductPTS system, trehalose-specific IIBC subunit 
Protein accessionACX41359 
Protein GI260450937 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAGCA AAATAAACCA AACGGATATC GATCGGTTGA TTGAACTGGT CGGCGGGCGC 
GGCAATATTG CGACGGTGAG CCACTGTATT ACTCGCCTAC GCTTTGTCCT CAACCAACCG
GCCAATGCCA GACCGAAAGA AATTGAGCAA CTCCCTATGG TGAAAGGCTG TTTCACCAAT
GCCGGGCAAT TTCAGGTGGT GATTGGCACC AACGTGGGTG ATTACTATCA AGCACTGATT
GCGTCAACCG GACAGGCGCA GGTTGATAAA GAGCAGGTAA AAAAAGCCGC CCGGCATAAT
ATGAAATGGC ATGAGCAGTT GATCTCTCAT TTCGCGGTGA TCTTCTTCCC GTTGCTGCCC
GCGTTGATTA GCGGCGGTTT GATCCTCGGT TTTCGCAATG TGATCGGCGA TTTGCCCATG
AGCAACGGTC AGACGCTGGC GCAAATGTAC CCTTCCCTGC AAACGATCTA CGATTTTCTG
TGGTTGATCG GTGAAGCGAT CTTCTTCTAC CTGCCGGTCG GTATTTGCTG GTCAGCGGTG
AAAAAAATGG GCGGCACGCC GATCCTTGGT ATCGTGCTTG GCGTGACACT GGTTTCTCCA
CAGCTGATGA ACGCTTATCT GCTCGGGCAG CAGCTGCCGG AAGTGTGGGA CTTTGGCATG
TTCAGCATCG CCAAAGTAGG CTATCAGGCG CAGGTGATCC CGGCACTGTT AGCCGGACTG
GCGCTGGGCG TTATTGAAAC TCGCCTTAAA CGCATCGTGC CGGATTACCT CTATCTGGTG
GTGGTACCCG TCTGTTCGCT GATCCTCGCG GTGTTCCTCG CCCATGCGCT GATTGGTCCG
TTTGGTCGCA TGATTGGCGA TGGCGTTGCC TTTGCGGTAC GTCACCTGAT GACCGGCAGC
TTTGCTCCGA TTGGCGCAGC ATTGTTTGGC TTCCTGTACG CCCCGCTGGT GATCACCGGT
GTACACCAGA CCACGCTTGC TATTGATTTG CAGATGATTC AAAGCATGGG TGGTACGCCA
GTGTGGCCGC TGATTGCGCT GTCGAATATC GCTCAGGGCT CCGCCGTGAT AGGCATTATC
ATTTCCAGCC GCAAGCACAA TGAACGCGAG ATCTCCGTGC CTGCCGCTAT CTCCGCCTGG
CTTGGGGTCA CTGAGCCTGC AATGTACGGC ATCAACCTGA AATATCGCTT CCCGATGCTG
TGCGCGATGA TTGGTTCTGG TCTGGCAGGA TTGCTATGCG GCCTGAACGG CGTTATGGCG
AATGGCATCG GCGTAGGCGG CCTGCCGGGA ATTCTCTCGA TTCAACCGAG CTACTGGCAG
GTGTTTGCGC TGGCAATGGC TATCGCCATC ATCATCCCGA TTGTACTCAC CTCGTTTATC
TATCAGCGGA AATACCGCCT GGGCACGCTG GACATTGTTT AA
 
Protein sequence
MMSKINQTDI DRLIELVGGR GNIATVSHCI TRLRFVLNQP ANARPKEIEQ LPMVKGCFTN 
AGQFQVVIGT NVGDYYQALI ASTGQAQVDK EQVKKAARHN MKWHEQLISH FAVIFFPLLP
ALISGGLILG FRNVIGDLPM SNGQTLAQMY PSLQTIYDFL WLIGEAIFFY LPVGICWSAV
KKMGGTPILG IVLGVTLVSP QLMNAYLLGQ QLPEVWDFGM FSIAKVGYQA QVIPALLAGL
ALGVIETRLK RIVPDYLYLV VVPVCSLILA VFLAHALIGP FGRMIGDGVA FAVRHLMTGS
FAPIGAALFG FLYAPLVITG VHQTTLAIDL QMIQSMGGTP VWPLIALSNI AQGSAVIGII
ISSRKHNERE ISVPAAISAW LGVTEPAMYG INLKYRFPML CAMIGSGLAG LLCGLNGVMA
NGIGVGGLPG ILSIQPSYWQ VFALAMAIAI IIPIVLTSFI YQRKYRLGTL DIV