Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_3746 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | - |
Start bp | 4039088 |
End bp | 4039681 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | ACX41351 |
Protein GI | 260450929 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 57 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCACTA AAAAACAATC TCGCGTTCCA GGTCGTCCCA GACGTTTCGC TCCTGAGCAG GCAATCTCTG CGGCAAAAGT GCTTTTTCAC CAAAAAGGTT TCGATGCTGT CAGTGTTGCT GAAGTTACTG ATTATCTTGG TATTAACCCC CCGAGCCTCT ACGCGGCTTT TGGCAGTAAA GCTGGGTTAT TTAGCCGTGT ACTCAATGAA TACGTCGGTA CGGAAGCTAT TCCGCTTGCC GATATTCTTC GTGATGATCG TCCGGTAGGC GAGTGCCTGG TTGAGGTATT AAAAGAAGCG GCGCGCAGAT ATAGCCAAAA CGGCGGCTGC GCTGGCTGTA TGGTTCTTGA AGGTATTCAT AGTCATGATC CACAAGCGCG TGATATTGCC GTTCAATATT ATCACGCCGC AGAAACGACC ATTTATGACT ACATCGCCAG GCGGCATCCA CAACGCGCAC AATGTGTGAC TGATTTTATG AGTACCGTGA TGTCTGGGCT TTCTGCGAAG GCACGAGAGG GGCACTCTAT AGAACAACTC TGTGCAACAG CTGCAATGGC GGGGGAAGCG ATAAAAACTA TTCTTGAGGA GTGA
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Protein sequence | MVTKKQSRVP GRPRRFAPEQ AISAAKVLFH QKGFDAVSVA EVTDYLGINP PSLYAAFGSK AGLFSRVLNE YVGTEAIPLA DILRDDRPVG ECLVEVLKEA ARRYSQNGGC AGCMVLEGIH SHDPQARDIA VQYYHAAETT IYDYIARRHP QRAQCVTDFM STVMSGLSAK AREGHSIEQL CATAAMAGEA IKTILEE
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