| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_3736 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 4026487 |
|---|
| End bp | 4027566 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | permease YjgP/YjgQ family protein |
|---|
| Protein accession | ACX41341 |
|---|
| Protein GI | 260450919 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.00233017 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGGGAGA CGCTCAAAAG CCAGCTGGCG ATACTCTTCA TCTTGCTTTT GATCTTCTTC
TGTCAAAAGT TAGTGAGGAT CCTCGGCGCA GCGGTTGACG GCGATATTCC GGCGAATCTG
GTGCTCTCCC TTCTCGGGTT GGGCGTGCCG GAAATGGCGC AGCTTATCCT GCCATTAAGC
CTGTTCCTCG GGCTGCTGAT GACGCTGGGC AAACTGTATA CCGAAAGTGA AATTACGGTA
ATGCATGCCT GCGGCCTGAG CAAAGCGGTT CTGGTGAAAG CGGCAATGAT CCTTGCGGTA
TTCACGGCAA TCGTAGCGGC GGTTAACGTG ATGTGGGCGG GACCGTGGTC ATCGCGTCAT
CAGGATGAAG TGTTAGCAGA AGCGAAAGCG AACCCTGGCA TGGCGGCGCT GGCGCAAGGG
CAATTCCAGC AAGCGACTAA TGGCAGCTCG GTGCTGTTCA TCGAAAGCGT TGACGGCAGC
GATTTCAAAG ATGTGTTCCT CGCGCAAATT CGACCAAAAG GTAATGCACG TCCTTCTGTG
GTGGTGGCCG ATTCCGGACA TTTAACCCAG CTGCGCGACG GCTCCCAGGT CGTCACTCTC
AACCAGGGAA CGCGCTTCGA AGGCACTGCA ATGTTACGTG ATTTCCGCAT TACGGACTTC
CAGGATTATC AGGCGATCAT TGGTCACCAG GCGGTGGCGC TCGACCCGAA CGATACCGAC
CAGATGGACA TGCGCACATT GTGGAACACT GACACCGATC GTGCTCGCGC AGAACTGAAC
TGGTGTATCA CGTTGGTATT CACCGTGTTT ATGATGGCAC TTATGGTCGT ACCGCTGAGC
GTGGTTAACC CACGTCAGGG ACGCGTACTG TCGATGCTGC CAGCCATGCT GCTGTATCTA
CTTTTCTTCC TGATCCAGAC CTCCCTGAAA TCGAACGGCG GTAAAGGTAA GCTGGACCCG
ACGCTGTGGA TGTGGACCGT TAACCTGATT TATCTGGCTT TAGCGATTGT TCTCAACCTT
TGGGACACCG TGCCGGTCCG CCGCCTGCGC GCCAGTTTTT CGCGTAAAGG AGCGGTGTGA
|
|---|
| Protein sequence | MRETLKSQLA ILFILLLIFF CQKLVRILGA AVDGDIPANL VLSLLGLGVP EMAQLILPLS
LFLGLLMTLG KLYTESEITV MHACGLSKAV LVKAAMILAV FTAIVAAVNV MWAGPWSSRH
QDEVLAEAKA NPGMAALAQG QFQQATNGSS VLFIESVDGS DFKDVFLAQI RPKGNARPSV
VVADSGHLTQ LRDGSQVVTL NQGTRFEGTA MLRDFRITDF QDYQAIIGHQ AVALDPNDTD
QMDMRTLWNT DTDRARAELN WCITLVFTVF MMALMVVPLS VVNPRQGRVL SMLPAMLLYL
LFFLIQTSLK SNGGKGKLDP TLWMWTVNLI YLALAIVLNL WDTVPVRRLR ASFSRKGAV
|
|---|
| |