Gene EcDH1_3735 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3735 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4025405 
End bp4026487 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content54% 
IMG OID 
Productpermease YjgP/YjgQ family protein 
Protein accessionACX41340 
Protein GI260450918 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.00436584 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACCTT TTGGCGTACT TGACCGCTAT ATCGGTAAAA CTATTTTCAC CACCATCATG 
ATGACACTGT TCATGCTGGT GTCGCTGTCG GGCATTATCA AGTTTGTCGA TCAGCTGAAA
AAAGCCGGGC AGGGGAGTTA CGACGCGTTA GGCGCAGGAA TGTATACCTT GCTGAGCGTG
CCGAAAGATG TGCAGATCTT CTTCCCGATG GCGGCTCTGC TTGGGGCGTT GCTTGGTCTT
GGGATGCTGG CGCAGCGCAG CGAACTGGTG GTGATGCAGG CTTCTGGTTT TACCCGTATG
CAGGTGGCGC TGTCGGTGAT GAAAACCGCC ATTCCGCTGG TCTTGCTGAC GATGGCGATT
GGCGAATGGG TCGCGCCGCA GGGCGAGCAG ATGGCGCGTA ACTACCGTGC GCAGGCGATG
TACGGCGGCT CGTTGCTCTC TACCCAGCAA GGCTTATGGG CGAAAGATGG CAACAACTTC
GTCTACATTG AGCGGGTTAA AGGTGACGAA GAGTTAGGTG GCATCAGCAT TTATGCCTTT
AACGAGAATC GTCGTCTGCA ATCCGTACGC TATGCCGCTA CTGCGAAGTT TGACCCGGAA
CATAAAGTCT GGCGTCTGTC GCAGGTTGAT GAATCTGATC TGACCAATCC GAAACAGATT
ACCGGTTCGC AGACGGTGAG CGGCACCTGG AAAACCAACC TCACGCCGGA CAAACTGGGC
GTGGTGGCGC TGGACCCGGA TGCACTCTCT ATCAGCGGTT TGCACAACTA TGTGAAGTAT
CTGAAGTCGA GCGGTCAGGA TGCCGGACGT TATCAGCTCA ACATGTGGAG CAAAATCTTC
CAGCCGCTAT CTGTGGCGGT GATGATGCTG ATGGCGCTGT CGTTCATCTT TGGCCCACTG
CGTAGCGTAC CGATGGGCGT GCGTGTGGTC ACCGGTATCA GTTTCGGTTT TGTCTTCTAC
GTACTGGACC AGATCTTCGG CCCGCTGACG TTGGTTTATG GCATCCCGCC GATCATCGGC
GCACTGTTGC CAAGCGCCAG CTTCTTCTTA ATCAGCCTGT GGCTGTTAAT GAGAAAATCG
TAA
 
Protein sequence
MQPFGVLDRY IGKTIFTTIM MTLFMLVSLS GIIKFVDQLK KAGQGSYDAL GAGMYTLLSV 
PKDVQIFFPM AALLGALLGL GMLAQRSELV VMQASGFTRM QVALSVMKTA IPLVLLTMAI
GEWVAPQGEQ MARNYRAQAM YGGSLLSTQQ GLWAKDGNNF VYIERVKGDE ELGGISIYAF
NENRRLQSVR YAATAKFDPE HKVWRLSQVD ESDLTNPKQI TGSQTVSGTW KTNLTPDKLG
VVALDPDALS ISGLHNYVKY LKSSGQDAGR YQLNMWSKIF QPLSVAVMML MALSFIFGPL
RSVPMGVRVV TGISFGFVFY VLDQIFGPLT LVYGIPPIIG ALLPSASFFL ISLWLLMRKS