Gene EcDH1_3711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3711 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4000396 
End bp4001394 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content61% 
IMG OID 
Producttransport system permease protein 
Protein accessionACX41319 
Protein GI260450897 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCGA TAAAACACCC GGTGCTGCTG TGGGGGCTTC CCGTTGCAGC ACTTATTATT 
ATTTTCTGGC TGAGTCTGTT TTGCTACTCG GCCATTCCTG TTTCCGGAGC AGATGCAACC
CGCGCCCTGC TGCCTGGACA CACGCCAACG CTACCAGAAG CGCTGGTGCA AAACCTTCGT
TTGCCACGAA GCCTGGTCGC CGTTCTGATC GGCGCAAGCC TGGCGCTCGC GGGCACGCTG
CTGCAAACCC TGACCCACAA CCCAATGGCC TCTCCTTCAC TGCTCGGCAT TAACAGCGGC
GCGGCGCTGG CTATGGCGCT TACCAGCGCG CTGAGTCCGA CGCCGATTGC AGGCTATTCT
CTGTCATTCA TCGCGGCATG CGGGGGCGGC GTGAGCTGGC TGCTGGTCAT GACCGCAGGA
GGCGGATTTC GTCATACCCA TGACAGAAAC AAACTGATCC TCGCGGGTAT CGCGCTGTCG
GCCTTTTGTA TGGGCCTTAC CCGCATCACC CTGCTGCTGG CCGAAGATCA TGCTTACGGC
ATCTTTTACT GGCTGGCAGG CGGAGTGTCC CACGCCCGCT GGCAGGATGT CTGGCAGCTC
TTGCCGGTGG TGGTCACTGC AGTCCCTGTC GTGTTGCTGC TGGCGAATCA ACTGAACCTG
CTCAACCTCA GCGACAGCAC CGCCCATACG CTGGGAGTGA ACCTGACGAG GCTACGTTTG
GTCATCAATA TGTTAGTGCT GCTTCTGGTT GGTGCGTGCG TCAGCGTAGC AGGTCCGGTG
GCGTTTATCG GTCTGCTGGT GCCACATCTG GCGCGCTTCT GGGCAGGCTT CGATCAGCGC
AACGTACTGC CAGTGAGCAT GCTGCTGGGG GCCACGCTGA TGCTGCTGGC AGATGTACTC
GCACGCGCGC TGGCCTTCCC CGGAGATCTG CCCGCAGGCG CAGTGCTGGC GCTGATTGGC
AGCCCTTGCT TTGTCTGGCT TGTGAGGAGG CGAGGATGA
 
Protein sequence
MTAIKHPVLL WGLPVAALII IFWLSLFCYS AIPVSGADAT RALLPGHTPT LPEALVQNLR 
LPRSLVAVLI GASLALAGTL LQTLTHNPMA SPSLLGINSG AALAMALTSA LSPTPIAGYS
LSFIAACGGG VSWLLVMTAG GGFRHTHDRN KLILAGIALS AFCMGLTRIT LLLAEDHAYG
IFYWLAGGVS HARWQDVWQL LPVVVTAVPV VLLLANQLNL LNLSDSTAHT LGVNLTRLRL
VINMLVLLLV GACVSVAGPV AFIGLLVPHL ARFWAGFDQR NVLPVSMLLG ATLMLLADVL
ARALAFPGDL PAGAVLALIG SPCFVWLVRR RG