Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_3711 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | + |
Start bp | 4000396 |
End bp | 4001394 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | transport system permease protein |
Protein accession | ACX41319 |
Protein GI | 260450897 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCGCGA TAAAACACCC GGTGCTGCTG TGGGGGCTTC CCGTTGCAGC ACTTATTATT ATTTTCTGGC TGAGTCTGTT TTGCTACTCG GCCATTCCTG TTTCCGGAGC AGATGCAACC CGCGCCCTGC TGCCTGGACA CACGCCAACG CTACCAGAAG CGCTGGTGCA AAACCTTCGT TTGCCACGAA GCCTGGTCGC CGTTCTGATC GGCGCAAGCC TGGCGCTCGC GGGCACGCTG CTGCAAACCC TGACCCACAA CCCAATGGCC TCTCCTTCAC TGCTCGGCAT TAACAGCGGC GCGGCGCTGG CTATGGCGCT TACCAGCGCG CTGAGTCCGA CGCCGATTGC AGGCTATTCT CTGTCATTCA TCGCGGCATG CGGGGGCGGC GTGAGCTGGC TGCTGGTCAT GACCGCAGGA GGCGGATTTC GTCATACCCA TGACAGAAAC AAACTGATCC TCGCGGGTAT CGCGCTGTCG GCCTTTTGTA TGGGCCTTAC CCGCATCACC CTGCTGCTGG CCGAAGATCA TGCTTACGGC ATCTTTTACT GGCTGGCAGG CGGAGTGTCC CACGCCCGCT GGCAGGATGT CTGGCAGCTC TTGCCGGTGG TGGTCACTGC AGTCCCTGTC GTGTTGCTGC TGGCGAATCA ACTGAACCTG CTCAACCTCA GCGACAGCAC CGCCCATACG CTGGGAGTGA ACCTGACGAG GCTACGTTTG GTCATCAATA TGTTAGTGCT GCTTCTGGTT GGTGCGTGCG TCAGCGTAGC AGGTCCGGTG GCGTTTATCG GTCTGCTGGT GCCACATCTG GCGCGCTTCT GGGCAGGCTT CGATCAGCGC AACGTACTGC CAGTGAGCAT GCTGCTGGGG GCCACGCTGA TGCTGCTGGC AGATGTACTC GCACGCGCGC TGGCCTTCCC CGGAGATCTG CCCGCAGGCG CAGTGCTGGC GCTGATTGGC AGCCCTTGCT TTGTCTGGCT TGTGAGGAGG CGAGGATGA
|
Protein sequence | MTAIKHPVLL WGLPVAALII IFWLSLFCYS AIPVSGADAT RALLPGHTPT LPEALVQNLR LPRSLVAVLI GASLALAGTL LQTLTHNPMA SPSLLGINSG AALAMALTSA LSPTPIAGYS LSFIAACGGG VSWLLVMTAG GGFRHTHDRN KLILAGIALS AFCMGLTRIT LLLAEDHAYG IFYWLAGGVS HARWQDVWQL LPVVVTAVPV VLLLANQLNL LNLSDSTAHT LGVNLTRLRL VINMLVLLLV GACVSVAGPV AFIGLLVPHL ARFWAGFDQR NVLPVSMLLG ATLMLLADVL ARALAFPGDL PAGAVLALIG SPCFVWLVRR RG
|
| |