Gene EcDH1_3708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3708 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3996088 
End bp3997041 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content59% 
IMG OID 
Productanti-FecI sigma factor, FecR 
Protein accessionACX41316 
Protein GI260450894 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.142917 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCCTT TGTTAACCGA TTCCCGCCGT CAGGCGCTGC GTTCAGCTTC CCACTGGTAT 
GCCGTGCTAA GCGGCGAGCG CGTCAGCCCA CAACAGGAAG CGCGCTGGCA ACAGTGGTAT
GAACAGGATC AGGATAACCA GTGGGCCTGG CAGCAGGTTG AAAACCTGCG CAACCAGCTT
GGCGGTGTGC CTGGCGACGT TGCCAGCCGG GCGTTGCACG ATACCCGCCT CACCCGCCGT
CACGTGATGA AAGGATTACT GCTGTTGCTC GGCGCTGGCG GAGGCTGGCA GCTCTGGCAG
TCGGAAACCG GCGAAGGTCT GCGGGCAGAT TACCGCACCG CCAAAGGCAC AGTCAGCCGT
CAACAACTGG AAGATGGCTC CCTGCTCACG CTGAATACCC AAAGCGCGGC GGATGTGCGT
TTTGATGCGC ATCAGCGCAC CGTCCGGCTC TGGTACGGTG AAATCGCCAT TACTACCGCG
AAAGATGCCC TGCAACGCCC CTTCCGTGTC CTGACCCGTC AGGGCCAGCT CACTGCTTTA
GGGACAGAAT TTACCGTCCG CCAGCAGGAT AATTTCACGC AGCTTGACGT GCAGCAGCAC
GCTGTGGAAG TGCTTCTCGC CAGTGCCCCC GCGCAAAAAC GCATCGTGAA CGCTGGTGAA
AGCCTGCAGT TCAGCGCCTC TGAGTTTGGC GCAGTGAAAC CGCTGGATGA CGAGAGTACA
AGCTGGACGA AGGACATCCT GAGCTTCAGC GATAAACCGC TGGGTGAGGT GATAGCCACG
CTAACCCGTT ACCGCAACGG CGTGCTGCGC TGCGATCCCG CCGTTGCCGG GCTGCGCCTG
AGCGGGACGT TCCCGCTGAA AAATACCGAT GCGATCCTGA ACGTTATCGC GCAAACGCTT
CCCGTTAAAA TTCAGTCTAT TACGCGGTAC TGGATAAACA TTTCACCACT GTAA
 
Protein sequence
MNPLLTDSRR QALRSASHWY AVLSGERVSP QQEARWQQWY EQDQDNQWAW QQVENLRNQL 
GGVPGDVASR ALHDTRLTRR HVMKGLLLLL GAGGGWQLWQ SETGEGLRAD YRTAKGTVSR
QQLEDGSLLT LNTQSAADVR FDAHQRTVRL WYGEIAITTA KDALQRPFRV LTRQGQLTAL
GTEFTVRQQD NFTQLDVQQH AVEVLLASAP AQKRIVNAGE SLQFSASEFG AVKPLDDEST
SWTKDILSFS DKPLGEVIAT LTRYRNGVLR CDPAVAGLRL SGTFPLKNTD AILNVIAQTL
PVKIQSITRY WINISPL