Gene EcDH1_3700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3700 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3986917 
End bp3987699 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content50% 
IMG OID 
Producttranscriptional regulator, DeoR family 
Protein accessionACX41309 
Protein GI260450887 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAAC AGAGACCTGA CCGTATCAAA CAGATGCTGC ACTACCTGTG GCAACATCGT 
CACCTCTCCA CACAGCAGGC CATGGAGCTT TTTGGCTATG CGGAAGCGAC TGTCCGTCGT
GATTTCCAGT ATATTGTCAA CCAGTATCCA GGCATGATCC GCGGTCACGG TTGCCTGGAC
TTCGACGACA GTACAGACGA CAAAGAGTAC GTCTTCGACG TGAAACGTAC ATTGCAATCT
GTGGCGAAAA GAGAAATAGC TGCCCTTGCC CGAACAATGA TCAAAGATGG CGACTGCTTT
TTTCTCGACT CCGGCTCAAC CTGCCTCGAA CTGGCGAAAT GCCTGGCCGA TGCGCGGGTA
AAGGTCATCT GCAACGACAT TAAAATCGCC AATGAACTGG GCTGTTTTCC CCATGTGGAA
AGTTACATTA TCGGAGGACT GATTCGCCCA GGTTATTTTT CGGTAGGAGA GAGTCTGGCG
CTGGAGATGA TCAATGCCTT TTCCGTAGAA CGTGCGTTTA TCTCCTGCGA TGCGCTGTCG
CTGGAGACGG GGATCACCAA TGCCACCATG TTTGAGGTCG GGGTGAAAAC ACGGATTATT
CAACGCTCGC GTGAAGTTAT TCTCATGGCC GATCACTCAA AATTTGATGC CGTTGAGCCG
CATGCTGTAG CAACACTATC ATGTATTAAA ACGATCATCA GTGACAGCGG GTTACCTGAG
ACTATTGCAC AGCGTTATCA GCGAGCCGGA TGTCAGTTGT TTTTACCTCA TTCAATAAAG
TGA
 
Protein sequence
MSQQRPDRIK QMLHYLWQHR HLSTQQAMEL FGYAEATVRR DFQYIVNQYP GMIRGHGCLD 
FDDSTDDKEY VFDVKRTLQS VAKREIAALA RTMIKDGDCF FLDSGSTCLE LAKCLADARV
KVICNDIKIA NELGCFPHVE SYIIGGLIRP GYFSVGESLA LEMINAFSVE RAFISCDALS
LETGITNATM FEVGVKTRII QRSREVILMA DHSKFDAVEP HAVATLSCIK TIISDSGLPE
TIAQRYQRAG CQLFLPHSIK