Gene EcDH1_3687 details

Gene Information

• Locus tag: EcDH1_3687
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli DH1
• Kingdom: Bacteria
• Replicon accession: CP001637
• Strand: +
• Start bp: 3974304
• End bp: 3975020
• Gene Length: 717 bp
• Protein Length: 238 aa
• Translation table: 11
• GC content: 43%
• Product: Oligogalacturonate-specific porin
• Protein accession: ACX41297
• Protein GI: 260450875

Plasmid Coverage information

• Num covering plasmid clones: 50
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAGG CTAAAATACT TTCTGGCGTA TTATTACTGT GCTTTTCGTC CCCATTAATT 
TCTCAGGCTG CGACACTGGA CGTACGTGGT GGATATCGTA GTGGAAGCCA CGCCTATGAG 
ACTCGACTCA AAGTCAGTGA GGGATGGCAA AATGGATGGT GGGCAAGCAT GGAAAGTAAT 
ACCTGGAATA CCATTCATGA TAATAAAAAG GAAAATGCCG CACTCAATGA TGTTCAGGTT 
GAAGTTAATT ACGCGATTAA ACTTGATGAT CAATGGACGG TGCGCCCGGG AATGTTAACG 
CATTTTAGCA GCAACGGCAC ACGCTACGGA CCCTACGTAA AACTGTCCTG GGACGCGACA 
AAAGATCTTA ATTTTGGCAT TCGCTATCGT TACGACTGGA AAGCTTACCG ACAACAAGAC 
TTATCCGGTG ATATGTCTCG TGATAACGTT CATCGTTGGG ATGGATATGT CACTTACCAT 
ATTAATAGTG ATTTCACCTT CGCATGGCAA ACGACGCTAT ACAGCAAACA GAACGATTAT 
CGCTATGCAA ACCATAAGAA ATGGGCGACG GAAAATGCAT TTGTTCTACA ATACCATATG 
ACGCCCGATA TTACGCCATA CATAGAATAT GACTACCTTG ACCGTCAGGG TGTTTACAAC 
GGCAGAGATA ATTTATCGGA AAACAGTTAT CGCATTGGTG TGTCATTTAA ACTGTAG 

 

Protein sequence

MKKAKILSGV LLLCFSSPLI SQAATLDVRG GYRSGSHAYE TRLKVSEGWQ NGWWASMESN 
TWNTIHDNKK ENAALNDVQV EVNYAIKLDD QWTVRPGMLT HFSSNGTRYG PYVKLSWDAT 
KDLNFGIRYR YDWKAYRQQD LSGDMSRDNV HRWDGYVTYH INSDFTFAWQ TTLYSKQNDY 
RYANHKKWAT ENAFVLQYHM TPDITPYIEY DYLDRQGVYN GRDNLSENSY RIGVSFKL