| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_3682 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 3968762 |
|---|
| End bp | 3969301 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | Fimbrial protein |
|---|
| Protein accession | ACX41293 |
|---|
| Protein GI | 260450871 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 0.548011 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGGA AGAGATTATT TCTATTAGCG TCGTTGCTGC CAATGTTTGC TCTGGCCGGA
AATAAATGGA ATACCACGTT GCCCGGCGGA AATATGCAAT TTCAGGGCGT CATTATTGCG
GAAACTTGCC GGATTGAAGC CGGTGATAAA CAAATGACGG TCAATATGGG GCAAATCAGC
AGTAACCGGT TTCATGCGGT TGGGGAAGAT AGCGCACCGG TGCCTTTTGT TATTCATTTA
CGGGAATGTA GCACGGTGGT GAGTGAACGT GTAGGTGTGG CGTTTCACGG TGTCGCGGAT
GGTAAAAATC CGGATGTGCT TTCCGTGGGA GAGGGGCCAG GGATAGCCAC CAATATTGGC
GTAGCGTTGT TTGATGATGA AGGAAACCTC GTACCGATTA ATCGTCCTCC AGCAAACTGG
AAACGGCTTT ATTCAGGCTC TACTTCGCTA CATTTCATCG CCAAATATCG TGCTACCGGG
CGTCGGGTTA CTGGCGGCAT CGCCAATGCC CAGGCCTGGT TCTCTTTAAC CTATCAGTAA
|
|---|
| Protein sequence | MKRKRLFLLA SLLPMFALAG NKWNTTLPGG NMQFQGVIIA ETCRIEAGDK QMTVNMGQIS
SNRFHAVGED SAPVPFVIHL RECSTVVSER VGVAFHGVAD GKNPDVLSVG EGPGIATNIG
VALFDDEGNL VPINRPPANW KRLYSGSTSL HFIAKYRATG RRVTGGIANA QAWFSLTYQ
|
|---|
| |