Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_3679 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | - |
Start bp | 3964757 |
End bp | 3965287 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | Fimbrial protein |
Protein accession | ACX41290 |
Protein GI | 260450868 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.544356 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAACA AACCTTTTTA TCTTCTGTGC GCTTTTTTGT GGCTGGCGGT GAGTCACGCT TTGGCTGCGG ATAGCACGAT TACTATCCGC GGCTATGTCA GGGATAACGG CTGTAGTGTG GCCGCTGAAT CAACCAATTT TACTGTTGAT CTGATGGAAA ACGCGGCGAA GCAATTTAAC AACATTGGCG CGACGACTCC TGTTGTTCCA TTTCGTATTT TGCTGTCACC CTGTGGTAAT GCCGTTTCTG CCGTAAAGGT TGGGTTTACT GGCGTTGCAG ATAGCCACAA TGCCAACCTG CTTGCACTTG AAAATACGGT GTCAGCGGCT TCGGGACTGG GAATACAGCT TCTGAATGAG CAGCAAAATC AAATACCCCT TAATGCTCCA TCGTCCGCGC TTTCGTGGAC GACCCTGACG CCGGGTAAAC CAAATACGCT GAATTTTTAC GCCCGGCTAA TGGCGACACA GGTGCCTGTC ACTGCGGGGC ATATCAATGC CACGGCTACC TTCACTCTTG AATATCAGTA A
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Protein sequence | MRNKPFYLLC AFLWLAVSHA LAADSTITIR GYVRDNGCSV AAESTNFTVD LMENAAKQFN NIGATTPVVP FRILLSPCGN AVSAVKVGFT GVADSHNANL LALENTVSAA SGLGIQLLNE QQNQIPLNAP SSALSWTTLT PGKPNTLNFY ARLMATQVPV TAGHINATAT FTLEYQ
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