Gene EcDH1_3679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3679 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3964757 
End bp3965287 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content50% 
IMG OID 
ProductFimbrial protein 
Protein accessionACX41290 
Protein GI260450868 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.544356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAACA AACCTTTTTA TCTTCTGTGC GCTTTTTTGT GGCTGGCGGT GAGTCACGCT 
TTGGCTGCGG ATAGCACGAT TACTATCCGC GGCTATGTCA GGGATAACGG CTGTAGTGTG
GCCGCTGAAT CAACCAATTT TACTGTTGAT CTGATGGAAA ACGCGGCGAA GCAATTTAAC
AACATTGGCG CGACGACTCC TGTTGTTCCA TTTCGTATTT TGCTGTCACC CTGTGGTAAT
GCCGTTTCTG CCGTAAAGGT TGGGTTTACT GGCGTTGCAG ATAGCCACAA TGCCAACCTG
CTTGCACTTG AAAATACGGT GTCAGCGGCT TCGGGACTGG GAATACAGCT TCTGAATGAG
CAGCAAAATC AAATACCCCT TAATGCTCCA TCGTCCGCGC TTTCGTGGAC GACCCTGACG
CCGGGTAAAC CAAATACGCT GAATTTTTAC GCCCGGCTAA TGGCGACACA GGTGCCTGTC
ACTGCGGGGC ATATCAATGC CACGGCTACC TTCACTCTTG AATATCAGTA A
 
Protein sequence
MRNKPFYLLC AFLWLAVSHA LAADSTITIR GYVRDNGCSV AAESTNFTVD LMENAAKQFN 
NIGATTPVVP FRILLSPCGN AVSAVKVGFT GVADSHNANL LALENTVSAA SGLGIQLLNE
QQNQIPLNAP SSALSWTTLT PGKPNTLNFY ARLMATQVPV TAGHINATAT FTLEYQ