| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_3674 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 3958668 |
|---|
| End bp | 3960128 |
|---|
| Gene Length | 1461 bp |
|---|
| Protein Length | 486 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | |
|---|
| Product | Mannitol dehydrogenase domain protein |
|---|
| Protein accession | ACX41285 |
|---|
| Protein GI | 260450863 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTACTA TTGTTGACAG CAATCTGCCG GTTGCCCGCC CGTCATGGGA TCATTCTCGT
CTGGAATCAC GCATTGTGCA TCTCGGTTGC GGGGCGTTTC ACCGCGCGCA CCAGGCGCTG
TATACCCATC ATCTGCTGGA AAGCACCGAC AGCGACTGGG GCATCTGCGA AGTTAACCTG
ATGCCAGGCA ACGACCGCGT GCTGATCGAA AACCTGAAAA AACAGCAACT GCTGTACACC
GTAGCGGAAA AAGGCGCAGA GAGCACCGAG CTGAAAATTA TCGGTTCGAT GAAAGAAGCG
CTGCATCCGG AAATCGATGG CTGCGAAGGT ATTCTCAACG CGATGGCGCG TCCGCAAACG
GCGATTGTCT CTCTAACGGT CACGGAAAAA GGCTACTGCG CTGATGCGGC AAGCGGTCAA
CTGGATCTCA ATAACCCGCT GATCAAGCAC GATCTGGAAA ACCCGACTGC GCCGAAGTCC
GCGATTGGTT ACATCGTCGA AGCGTTGCGT CTGCGTCGTG AAAAAGGGTT GAAAGCGTTT
ACGGTGATGT CCTGCGATAA CGTGCGTGAA AACGGTCATG TGGCGAAGGT CGCGGTACTG
GGGCTGGCTC AGGCGCGTGA CCCGCAGCTG GCGGCATGGA TTGAAGAAAA TGTCACCTTC
CCGTGCACCA TGGTTGACCG CATCGTTCCG GCGGCGACGC CAGAAACCTT ACAGGAAATT
GCTGACCAGC TGGGTGTTTA CGACCCGTGC GCCATTGCCT GCGAACCGTT TCGTCAGTGG
GTGATTGAAG ATAACTTCGT TAATGGTCGC CCGGATTGGG ATAAAGTGGG CGCACAGTTC
GTTGCAGACG TTGTGCCGTT CGAAATGATG AAGCTGCGTA TGCTGAACGG CAGCCACTCT
TTTCTGGCGT ACCTCGGTTA CCTCGGCGGC TATGAAACCA TTGCCGACAC CGTGACTAAC
CCGGCTTATC GCAAAGCGGC CTTTGCCCTG ATGATGCAGG AACAAGCGCC AACGCTGTCG
ATGCCGGAAG GTACAGACCT GAACGCCTAT GCGACGCTGC TGATCGAGCG TTTCAGCAAC
CCGTCTCTGC GTCACCGTAC CTGGCAGATT GCGATGGACG GCAGCCAGAA GTTACCGCAG
CGTCTGCTGG ACCCGGTGCG TCTGCACCTG CAAAACGGCG GCAGCTGGCG TCACCTGGCG
CTGGGCGTGG CTGGCTGGAT GCGTTACACC CAGGGCGTGG ATGAGCAGGG TAATGCCATT
GACGTGGTCG ACCCGATGCT GGCGGAGTTC CAGAAGATCA ACGCGCAGTA TCAGGGCGCA
GACCGCGTGA AAGCGCTGCT GGGCCTGAGC GGTATTTTTG CCGATGATCT GCCGCAGAAT
GCCGACTTTG TTGGCGCAGT GACGGCGGCA TATCAGCAGC TGTGCGAACG CGGTGCGCGC
GAGTGTGTGG CTGCGCTGTA A
|
|---|
| Protein sequence | MTTIVDSNLP VARPSWDHSR LESRIVHLGC GAFHRAHQAL YTHHLLESTD SDWGICEVNL
MPGNDRVLIE NLKKQQLLYT VAEKGAESTE LKIIGSMKEA LHPEIDGCEG ILNAMARPQT
AIVSLTVTEK GYCADAASGQ LDLNNPLIKH DLENPTAPKS AIGYIVEALR LRREKGLKAF
TVMSCDNVRE NGHVAKVAVL GLAQARDPQL AAWIEENVTF PCTMVDRIVP AATPETLQEI
ADQLGVYDPC AIACEPFRQW VIEDNFVNGR PDWDKVGAQF VADVVPFEMM KLRMLNGSHS
FLAYLGYLGG YETIADTVTN PAYRKAAFAL MMQEQAPTLS MPEGTDLNAY ATLLIERFSN
PSLRHRTWQI AMDGSQKLPQ RLLDPVRLHL QNGGSWRHLA LGVAGWMRYT QGVDEQGNAI
DVVDPMLAEF QKINAQYQGA DRVKALLGLS GIFADDLPQN ADFVGAVTAA YQQLCERGAR
ECVAAL
|
|---|
| |