Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_3669 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | + |
Start bp | 3954740 |
End bp | 3955651 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | transcriptional regulator, LysR family |
Protein accession | ACX41280 |
Protein GI | 260450858 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.00272496 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGACT GTGGTGCGAT TTTGCATAAT ATTGAAACCA AATGGCTTTA TGATTTTCTG ACCCTGGAAA AATGCCGCAA TTTTTCCCAG GCGGCAGTCA GTCGCAACGT CTCGCAACCG GCATTCAGCC GCCGCATCCG TGCGCTGGAA CAGGCGATTG GTGTTGAATT GTTTAACCGC CAGGTAACGC CGCTGCAACT CTCAGAACAA GGGAAAATCT TCCATTCGCA GATCCGCCAT CTGTTGCAAC AGTTAGAGAG CAATCTGGCA GAGCTGCGTG GCGGCAGCGA TTACGCGCAA CGAAAAATCA AGATAGCCGC TGCACACTCT CTTTCCCTCG GGCTGTTACC GTCCATTATC AGCCAGATGC CGCCGCTCTT TACCTGGGCA ATTGAAGCTA TTGATGTCGA TGAAGCGGTC GATAAACTGC GTGAAGGGCA AAGTGACTGT ATTTTTTCCT TTCACGACGA AGATTTGCTG GAAGCGCCGT TTGACCACAT TCGCTTATTT GAATCTCAAT TGTTCCCTGT CTGCGCCAGT GACGAACACG GAGAAGCACT TTTTAACCTC GCGCAGCCAC ACTTTCCGTT ACTGAATTAC AGCCGCAACT CCTACATGGG GCGATTGATT AATCGCACCC TGACGCGCCA CAGTGAGTTA AGTTTCAGCA CCTTTTTTGT CTCTTCGATG AGCGAGCTTT TAAAGCAGGT TGCCCTCGAC GGCTGTGGGA TTGCCTGGCT GCCGGAGTAC GCCATCCAAC AAGAAATTCG CAGCGGGAAG CTCGTTGTAC TGAATCGGGA CGAACTGGTG ATCCCGATTC AGGCCTATGC ATACCGGATG AATACCCGCA TGAATCCCGT TGCCGAACGC TTCTGGCGTG AACTGCGCGA GCTGGAGATT GTGCTTAGCT GA
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Protein sequence | MDDCGAILHN IETKWLYDFL TLEKCRNFSQ AAVSRNVSQP AFSRRIRALE QAIGVELFNR QVTPLQLSEQ GKIFHSQIRH LLQQLESNLA ELRGGSDYAQ RKIKIAAAHS LSLGLLPSII SQMPPLFTWA IEAIDVDEAV DKLREGQSDC IFSFHDEDLL EAPFDHIRLF ESQLFPVCAS DEHGEALFNL AQPHFPLLNY SRNSYMGRLI NRTLTRHSEL SFSTFFVSSM SELLKQVALD GCGIAWLPEY AIQQEIRSGK LVVLNRDELV IPIQAYAYRM NTRMNPVAER FWRELRELEI VLS
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