Gene EcDH1_3653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3653 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3936174 
End bp3938894 
Gene Length2721 bp 
Protein Length906 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionACX41265 
Protein GI260450843 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTATGTGA ACCAGCGACA AAATTGTGAC TGTGGAAGCC CTGTATACGA AGTTGCATTC 
TGTAATGATT GTAATGAGCC TCATCTTCTG GCACGGGACA AAAAGGGCAA ACTAGTCCAG
TGGGAAAATA AAGGTGGCGA TGAATTCTCT TTGCAGGATG AAGTACCTGT TGAACATGAC
GCTACAGAAG AAAAAGTCGA AAAAGAGAAC AGTTTTCAGC CTCCGTTGAT TATTGCCGCA
GGAGAGACCA GCGAGGCAGG TTATACCCTA CAACGCCTCG ACCGTCAGAC GCGCCGTATT
GGCGTTATTA ACAATGACAG CATTCCGCTG ATTATTAATG ATATTGAACA GGTTTGTAGT
GCCAGTGGCT GTGGCTACAG AGGCATGAGT GGGAAACAGC CCTTCCGGCG TGCACTATTA
GGTGGGCCAT TTTACGTTAC TAATATCGTG CCCACCGTTC TAGAGTATTG TCAGGACTTT
ACCAGTGATG AAGGCAAAGA GGGCGTCGGA CCAGATTCGT TGCCAGGACG AGGTCGTCGA
CTCATCACCT TTACAGACAG TCGACAAGGG ACAGCCCGAA TGGCGGTGCG TATGCAGCAA
GAAGCAGAAC GCAGTCGCTT ACGCGGAAGC GTAGTCGAAA TTCTCAGCTG GCATCAAAGG
ACGCAAACGT CTACAGCGCC GAATGCCAAT GCCGATCTGG AAAAATTAGC GGCCAGGGCG
AAGCAAGCCC GTGAGCAGGC AGAAGAATAT CGAAGCTGGG GAATGCCAGA CCAGGCGAAA
TTGTCACAAG CACAGGCTGA ACAGCTTGAA CAGGCTTATC AGGCTGCAAC CGGTGGGAAA
GCCGCGACTA TCCTGGTATC CCGAACCTGG ACGGAGATGG TTAACGAGCT TAAAGAGAGA
GCCGATATCC GCGGGCCGGT TCTGCAATAT AACCATTATC TTAAGCCTGA AGTGTTTAAT
GAAAACGGCG GCCCCCTTAA GCTTTCTGAA ATGTTGTTGT TCCGGGAATT CATGCGTCGC
CCTAAACGGA CTAACAGCCT GGAAACACAG GGGCTGGTTC AGGTTGGTTA CCAGGGGCTG
GAGAAAATAC ATAAGAGCCC CTTGCACTGG CAGGAAAAAG GATTAACGCT GGATGACTGG
CGCGATTTTC TCAAGGTTAC GTTGGATCAT TACGTTCGCG AGAGCAACTT CACACAGCTG
GATGATGAGC TGAAAAACTG GATTGGTAGC CGTTTTTCAT CAAAATTCGT CCGTAACCCG
GAATCAAAAG ATCCTGAAGA TAATCAGAAC AGACGCTGGC CTCAAATTCG TAATGGCAAC
GTATCCCATC GTTTAGCGAA GTTGCTGATG CTGGGGGCTG GATTCAAAAC CGTCAATGCG
GCAACTATTG ATATTATCAA TACATGGCTG AAAGAAGCAT GGGCCCAACT TACCGGACCG
CTTGCAGTAC TGAAACCCGA TGGCAACCGT TTTTATTTAC CGAAAGAGCA TATGACTTTT
TCTTTAATCA CGGATGCCTG GATTTGCCCG GTAACCAATA AAATCCTGGA TACGGCTTTT
AAAGGCTTAA CCCCTTATCT GCCTACCCAT ATTTCGTTCG AGCATCTTAC CCTGGCGCAA
TATGACACTT TTGTCGCGCA GAAAGTCACA ATGCCGGAAA TCTGGAAGCT GGATCGTTCA
CAGGAAGACT ACGCAGAGGG TCTGGCAAAA GCACGCGACT GGGTCAGCCA TGATCCGCTG
ATCGCACAAT TGCGGTCGGA AAACGTCTGG ACAGACATTA ACGATCGTGT CGTGGAAGGC
GGCTTCTACT ATCGTACTGC CGAGCACTCT GCCCAGCAGT CGTCAGAACG TCTGCAAAGC
TATGAAAAGA TGTTCAAGAA TGGGCAACTA AATGTTCTCA ACTGTTCCAC CACCATGGAA
ATGGGGGTTG ATACCGATCG CGTGATGACG CTGGCCTCTC GCAGCCAGCA GGCAACGATT
CCGGGGCCGG AGTGGCACCT GAATGACGAA CTGGTGGTGC GTAGTCTCGG TTATAAAACG
GTAGAACTGA ACGAGTTTAT TCTGCCGGCT AAAGCCACCA ACGCTGTCGA GCGGGTCAAA
GACATTCAGA TCCACAAACA GTTGAATGGA CCACTGTCGC AGTTTGGGCA ACGCTTCTGG
GACGTGCTGT TTAACGACCA TGAAGAAGCG CAGTCACTGA TGAATAACAC GCGAATTACC
GGCGTTCACT ATACCGATCG CTATCTGCAA AACCCGGTTG CGCTGGCGTT GTTGGGATCA
ATTCTGAGAC CGCTAAAAAC AAAGCTGACC GATGGCGCTG AAGTGACGCT GGATACGCTA
TTTAAAGATA AAGATCGCCC CGGTAACCGG CCTTTCCATG ACTGGATGAG CATAGCGGAT
TTTCAGGATT TCGCTGATCA GTGGTTTGCT GCTGCGCTGG GCAGGCCGGT AGAACTGACG
GTGTTCGACT CGCCGCGCGA TATCCCTCAC CATCGTAAAC TGACGGTGAC TTTTGAGGAT
GGTCAGGTAT TGAAGATCCG CTTCGATCAG GGGATGGGCT ACTGGCGCAT CAACTTTTCA
TCGCAATGGC ATTACTTTGA TTTCCGCGAT GACGTTTCTT TCCAGTTAGT CAAAATGGCT
CAGGCCTGCA AGGAAGGGAA TGTCGCCAAC AGCGAAGAGA GTTGGGCAAC GGATGTGCTG
GTGGAGGTGA TCGCCTCCTG A
 
Protein sequence
MYVNQRQNCD CGSPVYEVAF CNDCNEPHLL ARDKKGKLVQ WENKGGDEFS LQDEVPVEHD 
ATEEKVEKEN SFQPPLIIAA GETSEAGYTL QRLDRQTRRI GVINNDSIPL IINDIEQVCS
ASGCGYRGMS GKQPFRRALL GGPFYVTNIV PTVLEYCQDF TSDEGKEGVG PDSLPGRGRR
LITFTDSRQG TARMAVRMQQ EAERSRLRGS VVEILSWHQR TQTSTAPNAN ADLEKLAARA
KQAREQAEEY RSWGMPDQAK LSQAQAEQLE QAYQAATGGK AATILVSRTW TEMVNELKER
ADIRGPVLQY NHYLKPEVFN ENGGPLKLSE MLLFREFMRR PKRTNSLETQ GLVQVGYQGL
EKIHKSPLHW QEKGLTLDDW RDFLKVTLDH YVRESNFTQL DDELKNWIGS RFSSKFVRNP
ESKDPEDNQN RRWPQIRNGN VSHRLAKLLM LGAGFKTVNA ATIDIINTWL KEAWAQLTGP
LAVLKPDGNR FYLPKEHMTF SLITDAWICP VTNKILDTAF KGLTPYLPTH ISFEHLTLAQ
YDTFVAQKVT MPEIWKLDRS QEDYAEGLAK ARDWVSHDPL IAQLRSENVW TDINDRVVEG
GFYYRTAEHS AQQSSERLQS YEKMFKNGQL NVLNCSTTME MGVDTDRVMT LASRSQQATI
PGPEWHLNDE LVVRSLGYKT VELNEFILPA KATNAVERVK DIQIHKQLNG PLSQFGQRFW
DVLFNDHEEA QSLMNNTRIT GVHYTDRYLQ NPVALALLGS ILRPLKTKLT DGAEVTLDTL
FKDKDRPGNR PFHDWMSIAD FQDFADQWFA AALGRPVELT VFDSPRDIPH HRKLTVTFED
GQVLKIRFDQ GMGYWRINFS SQWHYFDFRD DVSFQLVKMA QACKEGNVAN SEESWATDVL
VEVIAS