Gene EcDH1_3608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3608 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3884482 
End bp3885714 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content51% 
IMG OID 
Producttranscriptional regulator, XRE family 
Protein accessionACX41221 
Protein GI260450799 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTCAT TTGATTACCT GAAAACTGCC ATCAAGCAAC AGGGCTGCAC GCTACAGCAG 
GTAGCTGATG CCAGCGGTAT GACCAAAGGG TATTTAAGCC AGTTACTGAA TGCCAAAATC
AAAAGCCCCA GCGCGCAAAA GCTGGAGGCG TTGCACCGTT TTTTGGGGCT TGAGTTTCCC
CGGCAGAAGA AAACGATCGG TGTCGTATTC GGTAAGTTCT ACCCACTGCA TACCGGACAT
ATCTACCTTA TCCAGCGCGC CTGTAGCCAG GTTGACGAGC TGCATATCAT TATGGGTTTT
GACGATACCC GTGACCGCGC GTTGTTCGAA GACAGTGCCA TGTCGCAGCA GCCGACCGTG
CCGGATCGTC TGCGTTGGTT ATTGCAAACT TTTAAATATC AGAAAAATAT TCGCATTCAT
GCTTTCAACG AAGAGGGCAT GGAGCCGTAT CCGCACGGCT GGGATGTGTG GAGCAACGGC
ATCAAAAAGT TTATGGCTGA AAAAGGGATC CAGCCGGATC TGATCTACAC CTCGGAAGAA
GCCGATGCGC CACAGTATAT GGAACATCTG GGGATCGAGA CGGTGCTGGT CGATCCGAAA
CGTACCTTTA TGAGTATCAG CGGTGCGCAG ATCCGCGAAA ACCCGTTCCG CTACTGGGAA
TATATTCCTA CCGAAGTGAA GCCGTTTTTT GTGCGTACCG TGGCGATCCT TGGCGGCGAG
TCGAGCGGTA AATCCACCCT GGTAAACAAA CTTGCCAATA TCTTCAACAC CACCAGTGCG
TGGGAATATG GCCGCGATTA TGTCTTTTCA CACCTCGGCG GTGATGAGAT CGCATTGCAG
TATTCTGACT ACGATAAAAT CGCGCTGGGC CACGCTCAAT ACATTGATTT TGCGGTGAAA
TATGCCAATA AAGTGGCATT TATCGATACC GATTTTGTCA CCACTCAGGC GTTCTGCAAA
AAGTACGAAG GGCGGGAACA TCCGTTCGTG CAGGCGCTGA TTGATGAATA CCGTTTCGAT
CTGGTGATCC TGCTGGAGAA CAACACGCCG TGGGTGGCGG ATGGTTTACG CAGCCTCGGC
AGTTCGGTGG ATCGCAAAGA GTTCCAGAAC TTGCTGGTGG AGATGCTCGA AGAGAACAAT
ATCGAATTTG TGCGGGTTGA AGAGGAAGAT TACGACAGTC GTTTCCTGCG CTGCGTGGAA
CTGGTGCGGG AGATGATGGG GGAGCAGAGA TAA
 
Protein sequence
MSSFDYLKTA IKQQGCTLQQ VADASGMTKG YLSQLLNAKI KSPSAQKLEA LHRFLGLEFP 
RQKKTIGVVF GKFYPLHTGH IYLIQRACSQ VDELHIIMGF DDTRDRALFE DSAMSQQPTV
PDRLRWLLQT FKYQKNIRIH AFNEEGMEPY PHGWDVWSNG IKKFMAEKGI QPDLIYTSEE
ADAPQYMEHL GIETVLVDPK RTFMSISGAQ IRENPFRYWE YIPTEVKPFF VRTVAILGGE
SSGKSTLVNK LANIFNTTSA WEYGRDYVFS HLGGDEIALQ YSDYDKIALG HAQYIDFAVK
YANKVAFIDT DFVTTQAFCK KYEGREHPFV QALIDEYRFD LVILLENNTP WVADGLRSLG
SSVDRKEFQN LLVEMLEENN IEFVRVEEED YDSRFLRCVE LVREMMGEQR