| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_3605 |
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| Symbol | |
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| ID | 0 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli DH1 |
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| Kingdom | Bacteria |
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| Replicon accession | CP001637 |
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| Strand | - |
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| Start bp | 3880359 |
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| End bp | 3882296 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | ACX41218 |
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| Protein GI | 260450796 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAAAAAG CCAAACAAGT TACCTGGCGG CTGTTGGCTG CCGGTGTCTG TCTGCTGACG
GTCAGCAGCG TGGCGCGAGC CGACTCACTG GATGAGCAGC GTAGTCGTTA CGCGCAAATC
AAGCAGGCCT GGGATAATCG ACAAATGGAT GTGGTCGAAC AAATGATGCC TGGACTGAAG
GATTATCCGC TTTATCCCTA CCTGGAATAC CGCCAGATCA CCGATGATCT GATGAATCAA
CCGGCGGTGA CGGTCACTAA CTTTGTTCGC GCTAACCCCA CGCTTCCTCC CGCTCGCACG
CTGCAATCTC GTTTCGTCAA TGAACTGGCG CGGCGTGAAG ACTGGCGTGG CTTGTTAGCC
TTTAGCCCGG AAAAGCCCGG AACTACCGAA GCGCAATGTA ATTACTACTA TGCGAAATGG
AACACCGGGC AGAGTGAAGA AGCCTGGCAA GGGGCGAAAG AGCTGTGGCT AACCGGCAAG
AGCCAGCCTA ACGCCTGTGA CAAGTTATTT AGCGTCTGGC GTGCGTCAGG TAAACAAGAT
CCGCTGGCGT ATTTAGAGCG TATCCGTCTG GCGATGAAAG CGGGTAACAC AGGCCTGGTA
ACAGTGCTGG CAGGGCAGAT GCCTGCCGAT TACCAGACTA TCGCCTCGGC AATCATTTCA
CTGGCGAACA ACCCTAATAC GGTACTGACC TTCGCGCGTA CAACTGGCGC GACCGATTTT
ACCCGTCAAA TGGCGGCGGT GGCGTTTGCC AGTGTGGCGC GGCAGGATGC TGAGAATGCA
CGGCTGATGA TCCCATCGCT TGCCCAGGCG CAGCAGCTTA ATGAAGATCA GATTCAGGAG
CTGCGCGATA TCGTCGCCTG GCGTTTGATG GGCAACGATG TCACCGACGA GCAGGCGAAA
TGGCGCGATG ACGCCATTAT GCGCTCGCAA TCTACTTCGC TTATTGAACG CCGTGTACGA
ATGGCGCTTG GCACCGGCGA TCGTCGCGGC CTGAATACCT GGCTGGCGCG TCTGCCTATG
GAAGCGAAAG AGAAAGATGA ATGGCGTTAC TGGCAGGCGG ATTTATTGCT GGAACGCGGA
CGTGAAGCTG AAGCAAAAGA GATTTTGCAT CAACTCATGC AACAGCGTGG TTTCTACCCG
ATGGTTGCAG CACAACGCAT CGGCGAAGAG TATGAGCTGA AGATTGATAA AGCGCCGCAG
AATGTTGACA GCGCCCTGAC TCAGGGGCCG GAGATGGCGC GCGTGCGCGA GTTGATGTAC
TGGAATCTCG ATAATACCGC GCGTAGCGAG TGGGCCAATC TGGTGAAGAG CAAGTCAAAA
ACAGAGCAGG CTCAACTGGC GCGGTATGCT TTCAACAACC AATGGTGGGA TCTTAGCGTT
CAGGCAACGA TCGCCGGGAA GCTGTGGGAT CATCTGGAAG AGCGATTCCC GCTGGCTTAC
AACGATCTTT TCAAACGCTA CACCAGCGGT AAGGAGATCC CGCAAAGCTA TGCGATGGCG
ATTGCTCGTC AGGAGAGCGC CTGGAATCCG AAAGTGAAAT CACCGGTAGG GGCCAGCGGC
TTGATGCAGA TTATGCCTGG TACAGCGACC CATACGGTGA AGATGTTCTC TATTCCCGGT
TATAGCAGTC CTGGGCAATT GCTGGATCCG GAAACGAATA TCAACATTGG CACCAGTTAC
CTGCAATATG TTTATCAGCA GTTTGGCAAT AATCGTATTT TCTCCTCAGC AGCTTATAAC
GCCGGACCAG GGCGGGTGCG AACCTGGCTT GGCAACAGCG CCGGGCGTAT CGACGCAGTG
GCATTTGTCG AGAGTATTCC ATTCTCCGAG ACGCGCGGTT ATGTGAAGAA CGTGCTGGCT
TATGACGCTT ACTACCGCTA TTTCATGGGG GATAAACCGA CGTTGATGAG CGCCACGGAA
TGGGGACGTC GTTACTGA
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| Protein sequence | MEKAKQVTWR LLAAGVCLLT VSSVARADSL DEQRSRYAQI KQAWDNRQMD VVEQMMPGLK
DYPLYPYLEY RQITDDLMNQ PAVTVTNFVR ANPTLPPART LQSRFVNELA RREDWRGLLA
FSPEKPGTTE AQCNYYYAKW NTGQSEEAWQ GAKELWLTGK SQPNACDKLF SVWRASGKQD
PLAYLERIRL AMKAGNTGLV TVLAGQMPAD YQTIASAIIS LANNPNTVLT FARTTGATDF
TRQMAAVAFA SVARQDAENA RLMIPSLAQA QQLNEDQIQE LRDIVAWRLM GNDVTDEQAK
WRDDAIMRSQ STSLIERRVR MALGTGDRRG LNTWLARLPM EAKEKDEWRY WQADLLLERG
REAEAKEILH QLMQQRGFYP MVAAQRIGEE YELKIDKAPQ NVDSALTQGP EMARVRELMY
WNLDNTARSE WANLVKSKSK TEQAQLARYA FNNQWWDLSV QATIAGKLWD HLEERFPLAY
NDLFKRYTSG KEIPQSYAMA IARQESAWNP KVKSPVGASG LMQIMPGTAT HTVKMFSIPG
YSSPGQLLDP ETNINIGTSY LQYVYQQFGN NRIFSSAAYN AGPGRVRTWL GNSAGRIDAV
AFVESIPFSE TRGYVKNVLA YDAYYRYFMG DKPTLMSATE WGRRY
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