Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_3601 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | + |
Start bp | 3877719 |
End bp | 3878588 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | transcriptional regulator, AraC family |
Protein accession | ACX41214 |
Protein GI | 260450792 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATCAGG CCGGCATTAT TCGCGACCTT TTAATCTGGC TGGAAGGTCA TCTGGATCAG CCCCTGTCGC TCGACAATGT AGCGGCGAAA GCAGGTTATT CCAAGTGGCA CTTACAGAGA ATGTTTAAAG ATGTCACTGG CCATGCTATT GGCGCGTATA TTCGTGCTCG TCGTTTGTCG AAATCGGCGG TCGCACTACG CCTGACTGCG CGTCCGATTC TGGACATCGC GCTGCAATAC CGCTTCGACT CTCAACAGAC ATTTACCCGC GCATTCAAGA AGCAGTTTGC CCAGACTCCT GCACTTTACC GCCGTTCTCC TGAATGGAGC GCCTTTGGTA TTCGCCCGCC GCTACGCCTG GGTGAATTCA CTATGCCAGA GCACAAATTT GTCACCCTGG AAGATACGCC GCTGATTGGT GTTACCCAGA GCTACTCCTG TTCGCTGGAG CAAATCTCTG ATTTCCGCCA TGAAATGCGT TATCAGTTCT GGCACGATTT TCTCGGCAAC GCGCCGACCA TTCCGCCGGT GCTCTACGGC CTGAATGAAA CGCGTCCGAG TCAGGATAAA GACGACGAGC AAGAGGTATT CTATACCACC GCGTTAGCCC AGGATCAGGC AGATGGCTAT GTACTGACGG GGCATCCGGT GATGCTGCAG GGCGGCGAAT ATGTGATGTT TACCTATGAA GGTCTGGGAA CCGGCGTGCA GGAGTTTATC CTGACGGTAT ACGGAACGTG CATGCCAATG CTCAACCTGA CGCGCCGTAA AGGTCAGGAT ATTGAGCGAT ACTACCCGGC AGAAGATGCC AAAGCGGGAG ATCGCCCAAT TAATCTACGC TGTGAACTGC TGATTCCGAT CCGTCGTTAA
|
Protein sequence | MDQAGIIRDL LIWLEGHLDQ PLSLDNVAAK AGYSKWHLQR MFKDVTGHAI GAYIRARRLS KSAVALRLTA RPILDIALQY RFDSQQTFTR AFKKQFAQTP ALYRRSPEWS AFGIRPPLRL GEFTMPEHKF VTLEDTPLIG VTQSYSCSLE QISDFRHEMR YQFWHDFLGN APTIPPVLYG LNETRPSQDK DDEQEVFYTT ALAQDQADGY VLTGHPVMLQ GGEYVMFTYE GLGTGVQEFI LTVYGTCMPM LNLTRRKGQD IERYYPAEDA KAGDRPINLR CELLIPIRR
|
| |