Gene EcDH1_3588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3588 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3862186 
End bp3863139 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content52% 
IMG OID 
Producttransaldolase 
Protein accessionACX41201 
Protein GI260450779 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGACA AATTGACCTC CCTTCGTCAG TACACCACCG TAGTGGCCGA CACTGGGGAC 
ATCGCGGCAA TGAAGCTGTA TCAACCGCAG GATGCCACAA CCAACCCTTC TCTCATTCTT
AACGCAGCGC AGATTCCGGA ATACCGTAAG TTGATTGATG ATGCTGTCGC CTGGGCGAAA
CAGCAGAGCA ACGATCGCGC GCAGCAGATC GTGGACGCGA CCGACAAACT GGCAGTAAAT
ATTGGTCTGG AAATCCTGAA ACTGGTTCCG GGCCGTATCT CAACTGAAGT TGATGCGCGT
CTTTCCTATG ACACCGAAGC GTCAATTGCG AAAGCAAAAC GCCTGATCAA ACTCTACAAC
GATGCTGGTA TTAGCAACGA TCGTATTCTG ATCAAACTGG CTTCTACCTG GCAGGGTATC
CGTGCTGCAG AACAGCTGGA AAAAGAAGGC ATCAACTGTA ACCTGACCCT GCTGTTCTCC
TTCGCTCAGG CTCGTGCTTG TGCGGAAGCG GGCGTGTTCC TGATCTCGCC GTTTGTTGGC
CGTATTCTTG ACTGGTACAA AGCGAATACC GATAAGAAAG AGTACGCTCC GGCAGAAGAT
CCGGGCGTGG TTTCTGTATC TGAAATCTAC CAGTACTACA AAGAGCACGG TTATGAAACC
GTGGTTATGG GCGCAAGCTT CCGTAACATC GGCGAAATTC TGGAACTGGC AGGCTGCGAC
CGTCTGACCA TCGCACCGGC ACTGCTGAAA GAGCTGGCGG AGAGCGAAGG GGCTATCGAA
CGTAAACTGT CTTACACCGG CGAAGTGAAA GCGCGTCCGG CGCGTATCAC TGAGTCCGAG
TTCCTGTGGC AGCACAACCA GGATCCAATG GCAGTAGATA AACTGGCGGA AGGTATCCGT
AAGTTTGCTA TTGACCAGGA AAAACTGGAA AAAATGATCG GCGATCTGCT GTAA
 
Protein sequence
MTDKLTSLRQ YTTVVADTGD IAAMKLYQPQ DATTNPSLIL NAAQIPEYRK LIDDAVAWAK 
QQSNDRAQQI VDATDKLAVN IGLEILKLVP GRISTEVDAR LSYDTEASIA KAKRLIKLYN
DAGISNDRIL IKLASTWQGI RAAEQLEKEG INCNLTLLFS FAQARACAEA GVFLISPFVG
RILDWYKANT DKKEYAPAED PGVVSVSEIY QYYKEHGYET VVMGASFRNI GEILELAGCD
RLTIAPALLK ELAESEGAIE RKLSYTGEVK ARPARITESE FLWQHNQDPM AVDKLAEGIR
KFAIDQEKLE KMIGDLL