Gene EcDH1_3574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3574 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3849029 
End bp3849970 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content54% 
IMG OID 
Productriboflavin biosynthesis protein RibF 
Protein accessionACX41188 
Protein GI260450766 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000715482 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTGA TACGCGGCAT ACATAATCTC AGCCAGGCCC CGCAAGAAGG GTGTGTGCTG 
ACTATTGGTA ATTTCGACGG CGTGCATCGC GGTCATCGCG CGCTGTTACA GGGCTTGCAG
GAAGAAGGGC GCAAGCGCAA CTTACCGGTG ATGGTGATGC TTTTTGAACC TCAACCACTG
GAACTGTTTG CTACCGATAA AGCCCCGGCA AGACTGACCC GGCTGCGGGA AAAACTGCGT
TACCTTGCAG AGTGTGGCGT TGATTACGTG CTGTGCGTGC GTTTCGACAG GCGTTTCGCG
GCGTTAACCG CGCAAAATTT CATCAGCGAT CTTCTGGTGA AGCATTTGCG CGTAAAATTT
CTTGCCGTAG GTGATGATTT CCGCTTTGGC GCTGGTCGTG AAGGCGATTT CTTGTTATTA
CAGAAAGCTG GCATGGAATA CGGCTTCGAT ATCACCAGTA CGCAAACTTT TTGCGAAGGT
GGCGTGCGCA TCAGCAGCAC CGCCGTGCGT CAGGCCCTTG CGGATGACAA TCTGGCTCTG
GCAGAGAGTT TACTGGGGCA CCCGTTTGCC ATCTCCGGGC GTGTAGTCCA CGGTGATGAA
TTAGGGCGCA CTATAGGTTT CCCGACGGCG AATGTACCGC TGCGCCGTCA GGTTTCCCCG
GTGAAAGGGG TTTATGCGGT AGAAGTGCTG GGCCTCGGTG AAAAGCCGTT ACCCGGCGTG
GCAAACATCG GAACACGCCC AACGGTTGCC GGTATTCGCC AGCAGCTGGA AGTGCATTTG
TTAGATGTTG CAATGGACCT TTACGGTCGC CATATACAAG TAGTGCTGCG TAAAAAAATA
CGCAATGAGC AGCGATTTGC GTCGCTGGAC GAACTGAAAG CGCAGATTGC GCGTGATGAA
TTAACCGCCC GCGAATTTTT TGGGCTAACA AAACCGGCTT AA
 
Protein sequence
MKLIRGIHNL SQAPQEGCVL TIGNFDGVHR GHRALLQGLQ EEGRKRNLPV MVMLFEPQPL 
ELFATDKAPA RLTRLREKLR YLAECGVDYV LCVRFDRRFA ALTAQNFISD LLVKHLRVKF
LAVGDDFRFG AGREGDFLLL QKAGMEYGFD ITSTQTFCEG GVRISSTAVR QALADDNLAL
AESLLGHPFA ISGRVVHGDE LGRTIGFPTA NVPLRRQVSP VKGVYAVEVL GLGEKPLPGV
ANIGTRPTVA GIRQQLEVHL LDVAMDLYGR HIQVVLRKKI RNEQRFASLD ELKAQIARDE
LTAREFFGLT KPA