| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_3562 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 3833553 |
|---|
| End bp | 3835106 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | ACX41176 |
|---|
| Protein GI | 260450754 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATATCA TTGGCGGACA ACATCTACGT CAAATGTGGG ACGATCTTGC GGACGTTTAC
GGTCATAAAA CGGCGCTGAT TTGTGAATCC AGCGGCGGAG TCGTTAACCG GTATAGTTAT
CTTGAGTTAA ATCAGGAGAT TAACCGCACG GCAAACCTGT TTTATACGCT GGGGATTCGC
AAAGGCGACA AGGTTGCACT ACATCTCGAC AACTGCCCGG AATTTATCTT TTGCTGGTTC
GGGCTGGCAA AAATTGGCGC GATTATGGTG CCGATTAACG CCCGCCTGTT GTGCGAGGAA
AGCGCGTGGA TCCTGCAAAA TAGCCAGGCG TGCCTGCTGG TGACCAGTGC GCAATTCTAT
CCTATGTATC AACAGATTCA GCAGGAAGAT GCCACTCAAT TGCGGCACAT TTGCCTGACA
GATGTGGCAC TTCCCGCTGA TGATGGCGTG AGTTCGTTTA CTCAACTGAA AAATCAACAA
CCTGCCACCT TGTGCTATGC ACCGCCGCTA TCGACTGACG ATACGGCGGA AATTCTCTTC
ACCTCCGGCA CCACCTCCCG ACCGAAAGGT GTGGTGATTA CCCATTACAA CCTGCGCTTC
GCTGGATATT ACTCCGCCTG GCAGTGTGCA CTGCGTGACG ATGACGTCTA CCTGACGGTA
ATGCCTGCGT TTCATATCGA TTGCCAGTGT ACTGCGGCGA TGGCGGCGTT TTCTGCCGGG
GCCACCTTTG TGCTGGTCGA GAAATACAGC GCCCGCGCCT TCTGGGGACA GGTACAGAAG
TACCGCGCCA CCGTTACCGA ATGTATTCCG ATGATGATCC GTACGTTGAT GGTACAGCCG
CCTTCAGCGA ACGATCAGCA ACACCGCCTG CGGGAAGTGA TGTTTTATCT CAACTTGTCG
GAGCAGGAAA AAGATGCGTT TTGTGAACGC TTCGGCGTTC GCTTGCTGAC GTCTTATGGG
ATGACGGAAA CCATTGTGGG CATTATCGGC GATCGTCCTG GCGATAAACG ACGCTGGCCG
TCGATTGGTC GGGTGGGGTT TTGCTACGAA GCGGAGATCC GCGACGATCA CAATCGCCCG
CTCCCGGCTG GTGAGATCGG TGAAATCTGC ATTAAAGGCA TACCTGGGAA AACCATCTTC
AAAGAGTACT TTCTCAACCC ACAAGCCACT GCGAAAGTGC TGGAAGCCGA TGGCTGGCTG
CATACCGGCG ATACCGGATA CCGCGACGAA GAGGACTTTT TTTATTTCGT CGATCGCCGC
TGCAATATGA TTAAACGTGG CGGCGAGAAT GTCTCCTGCG TGGAGCTGGA AAATATTATC
GCCGCGCACC CGAAAATTCA GGACATCGTG GTTGTGGGTA TTAAAGATTC GATTCGCGAT
GAAGCCATCA AAGCATTTGT GGTGCTGAAT GAAGGTGAAA CATTGAGCGA AGAGGAATTT
TTCCGCTTCT GCGAACAAAA TATGGCGAAA TTTAAAGTGC CCTCTTATCT GGAGATCAGA
AAAGATCTGC CACGTAATTG CTCGGGGAAA ATAATTAGAA AGAATCTGAA ATAA
|
|---|
| Protein sequence | MDIIGGQHLR QMWDDLADVY GHKTALICES SGGVVNRYSY LELNQEINRT ANLFYTLGIR
KGDKVALHLD NCPEFIFCWF GLAKIGAIMV PINARLLCEE SAWILQNSQA CLLVTSAQFY
PMYQQIQQED ATQLRHICLT DVALPADDGV SSFTQLKNQQ PATLCYAPPL STDDTAEILF
TSGTTSRPKG VVITHYNLRF AGYYSAWQCA LRDDDVYLTV MPAFHIDCQC TAAMAAFSAG
ATFVLVEKYS ARAFWGQVQK YRATVTECIP MMIRTLMVQP PSANDQQHRL REVMFYLNLS
EQEKDAFCER FGVRLLTSYG MTETIVGIIG DRPGDKRRWP SIGRVGFCYE AEIRDDHNRP
LPAGEIGEIC IKGIPGKTIF KEYFLNPQAT AKVLEADGWL HTGDTGYRDE EDFFYFVDRR
CNMIKRGGEN VSCVELENII AAHPKIQDIV VVGIKDSIRD EAIKAFVVLN EGETLSEEEF
FRFCEQNMAK FKVPSYLEIR KDLPRNCSGK IIRKNLK
|
|---|
| |