Gene EcDH1_3531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3531 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3795897 
End bp3796880 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content53% 
IMG OID 
Productthiamine ABC transporter, periplasmic binding protein 
Protein accessionACX41145 
Protein GI260450723 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTAAAAA AATGTCTGCC CCTGCTGTTG CTGTGCACAG CGCCCGTTTT CGCTAAACCC 
GTTCTGACTG TTTATACCTA CGATTCCTTC GCCGCCGACT GGGGGCCTGG TCCGGTGGTT
AAAAAAGCCT TTGAAGCCGA CTGTAATTGC GAACTGAAAC TGGTGGCGCT GGAAGATGGC
GTTTCGCTTC TCAACCGTCT ACGGATGGAA GGCAAAAACA GTAAAGCCGA TGTGGTGCTG
GGGCTGGATA ACAACCTGTT AGACGCCGCC AGTAAAACCG GACTGTTTGC CAAAAGCGGT
GTGGCAGCGG ATGCCGTTAA CGTTCCCGGC GGCTGGAATA ATGACACTTT CGTACCGTTT
GATTATGGCT ACTTCGCCTT CGTTTATGAC AAGAACAAAC TGAAAAACCC GCCACAAAGC
CTGAAAGAAC TGGTTGAGAG CGATCAAAAC TGGCGGGTGA TTTATCAGGA TCCGCGCACC
AGTACACCGG GGCTGGGTCT GTTGCTATGG ATGCAAAAAG TCTATGGCGA TGACGCCCCA
CAAGCCTGGC AGAAACTGGC GAAGAAAACG GTCACGGTCA CCAAAGGCTG GAGCGAAGCC
TACGGCCTGT TTTTAAAAGG TGAAAGCGAT CTGGTACTGA GTTACACCAC CTCTCCGGCT
TATCACATTC TCGAAGAGAA GAAAGATAAC TACGCCGCCG CGAACTTCAG CGAAGGTCAC
TATCTGCAAG TGGAAGTCGC CGCCCGCACC GCTGCCAGCA AGCAGCCGGA GCTGGCGCAA
AAATTCCTCC AGTTTATGGT TTCTCCGGCT TTCCAGAATG CGATCCCAAC CGGCAACTGG
ATGTATCCGG TGGCAAACGT CACGCTGCCT GCCGGTTTTG AAAAATTGAC CAAACCCGCA
ACCACGTTGG AGTTCACGCC AGCCGAAGTG GCGGCACAAC GTCAGGCATG GATTAGCGAA
TGGCAACGCG CCGTCAGCCG TTAA
 
Protein sequence
MLKKCLPLLL LCTAPVFAKP VLTVYTYDSF AADWGPGPVV KKAFEADCNC ELKLVALEDG 
VSLLNRLRME GKNSKADVVL GLDNNLLDAA SKTGLFAKSG VAADAVNVPG GWNNDTFVPF
DYGYFAFVYD KNKLKNPPQS LKELVESDQN WRVIYQDPRT STPGLGLLLW MQKVYGDDAP
QAWQKLAKKT VTVTKGWSEA YGLFLKGESD LVLSYTTSPA YHILEEKKDN YAAANFSEGH
YLQVEVAART AASKQPELAQ KFLQFMVSPA FQNAIPTGNW MYPVANVTLP AGFEKLTKPA
TTLEFTPAEV AAQRQAWISE WQRAVSR