Gene EcDH1_3520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3520 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3782345 
End bp3783349 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content55% 
IMG OID 
Producttranscriptional regulator, LacI family 
Protein accessionACX41135 
Protein GI260450713 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones68 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAACTGG ATGAAATCGC TCGGCTGGCG GGAGTGTCGC GGACCACTGC AAGCTATGTT 
ATTAACGGCA AAGCGAAGCA ATACCGTGTG AGCGACAAAA CCGTTGAAAA AGTCATGGCT
GTGGTGCGTG AGCACAATTA CCACCCGAAC GCCGTGGCAG CTGGGCTTCG TGCTGGACGC
ACACGTTCTA TTGGTCTTGT GATCCCCGAT CTGGAGAACA CCAGCTATAC CCGCATCGCT
AACTATCTTG AACGCCAGGC GCGGCAACGG GGTTATCAAC TGCTGATTGC CTGCTCAGAA
GATCAGCCAG ACAACGAAAT GCGGTGCATT GAGCACCTTT TACAGCGTCA GGTTGATGCC
ATTATTGTTT CGACGTCGTT GCCTCCTGAG CATCCTTTTT ATCAACGCTG GGCTAACGAC
CCGTTCCCGA TTGTCGCGCT GGACCGCGCC CTCGATCGTG AACACTTCAC CAGCGTGGTT
GGTGCCGATC AGGATGATGC CGAAATGCTG GCGGAAGAGT TACGTAAGTT TCCCGCCGAG
ACGATGCTTT ATCTTGGTGC GCTACCGGAG CTTTCTGTCA GCTTCCTGCG TGAACAAGGT
TTCCGTACTG CCTGGAAAGA TGATCCGCGC GAAGTGCATT TCCTGTATGC CAACAGCTAT
GAGCGGGAGG CGGCTGCCCA GTTATTCGAA AAATGGCTGG AAACGCATCC GATGCCGCAG
GCGCTGTTCA CAACGTCGTT TGCGTTGTTG CAAGGAGTGA TGGATGTCAC GCTGCGTCGC
GACGGCAAAC TGCCTTCTGA CCTGGCAATT GCCACCTTTG GCGATAACGA ACTGCTCGAC
TTCTTACAGT GTCCGGTGCT GGCAGTGGCT CAACGTCACC GCGATGTCGC AGAGCGTGTG
CTGGAGATTG TCCTGGCAAG CCTGGACGAA CCGCGTAAGC CAAAACCTGG TTTAACGCGC
ATTAAACGTA ATCTCTATCG CCGCGGCGTG CTCAGCCGTA GCTAA
 
Protein sequence
MKLDEIARLA GVSRTTASYV INGKAKQYRV SDKTVEKVMA VVREHNYHPN AVAAGLRAGR 
TRSIGLVIPD LENTSYTRIA NYLERQARQR GYQLLIACSE DQPDNEMRCI EHLLQRQVDA
IIVSTSLPPE HPFYQRWAND PFPIVALDRA LDREHFTSVV GADQDDAEML AEELRKFPAE
TMLYLGALPE LSVSFLREQG FRTAWKDDPR EVHFLYANSY EREAAAQLFE KWLETHPMPQ
ALFTTSFALL QGVMDVTLRR DGKLPSDLAI ATFGDNELLD FLQCPVLAVA QRHRDVAERV
LEIVLASLDE PRKPKPGLTR IKRNLYRRGV LSRS