Gene EcDH1_3514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3514 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3775369 
End bp3776727 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content55% 
IMG OID 
ProductUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase 
Protein accessionACX41129 
Protein GI260450707 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAGCG TAACCCTTAG CCAACTTACC GACATTCTCA ACGGTGAACT GCAAGGTGCA 
GATATCACCC TTGATGCTGT AACCACTGAT ACCCGAAAAC TGACGCCGGG CTGCCTGTTT
GTTGCCCTGA AAGGCGAACG TTTTGATGCC CACGATTTTG CCGACCAGGC GAAAGCTGGC
GGCGCAGGCG CACTACTGGT TAGCCGTCCG CTGGACATCG ACCTGCCGCA GTTAATCGTC
AAGGATACGC GTCTGGCGTT TGGTGAACTG GCTGCATGGG TTCGCCAGCA AGTTCCGGCG
CGCGTGGTTG CTCTGACGGG GTCCTCCGGC AAAACCTCCG TTAAAGAGAT GACGGCGGCG
ATTTTAAGCC AGTGCGGCAA CACGCTTTAT ACGGCAGGCA ATCTCAACAA CGACATCGGT
GTACCGATGA CGCTGTTGCG CTTAACGCCG GAATACGATT ACGCAGTTAT TGAACTTGGC
GCGAACCATC AGGGCGAAAT AGCCTGGACT GTGAGTCTGA CTCGCCCGGA AGCTGCGCTG
GTCAACAACC TGGCAGCGGC GCATCTGGAA GGTTTTGGCT CGCTTGCGGG TGTCGCGAAA
GCGAAAGGTG AAATCTTTAG CGGCCTGCCG GAAAACGGTA TCGCCATTAT GAACGCCGAC
AACAACGACT GGCTGAACTG GCAGAGCGTA ATTGGCTCAC GCAAAGTGTG GCGTTTCTCA
CCCAATGCCG CCAACAGCGA TTTCACCGCC ACCAATATCC ATGTGACCTC GCACGGTACG
GAATTTACCC TACAAACCCC AACCGGTAGC GTCGATGTTC TGCTGCCGTT GCCGGGGCGT
CACAATATTG CGAATGCGCT GGCAGCCGCT GCGCTCTCCA TGTCCGTGGG CGCAACGCTT
GATGCTATCA AAGCGGGGCT GGCAAATCTG AAAGCTGTTC CAGGCCGTCT GTTCCCCATC
CAACTGGCAG AAAACCAGTT GCTGCTCGAC GACTCCTACA ACGCCAATGT CGGTTCAATG
ACTGCAGCAG TCCAGGTACT GGCTGAAATG CCGGGCTACC GCGTGCTGGT GGTGGGCGAT
ATGGCGGAAC TGGGCGCTGA AAGCGAAGCC TGCCATGTAC AGGTGGGCGA GGCGGCAAAA
GCTGCTGGTA TTGACCGCGT GTTAAGCGTG GGTAAACAAA GCCATGCTAT CAGCACCGCC
AGCGGCGTTG GCGAACATTT TGCTGATAAA ACTGCGTTAA TTACGCGTCT TAAATTACTG
ATTGCTGAGC AACAGGTAAT TACGATTTTA GTTAAGGGTT CACGTAGTGC CGCCATGGAA
GAGGTAGTAC GCGCTTTACA GGAGAATGGG ACATGTTAG
 
Protein sequence
MISVTLSQLT DILNGELQGA DITLDAVTTD TRKLTPGCLF VALKGERFDA HDFADQAKAG 
GAGALLVSRP LDIDLPQLIV KDTRLAFGEL AAWVRQQVPA RVVALTGSSG KTSVKEMTAA
ILSQCGNTLY TAGNLNNDIG VPMTLLRLTP EYDYAVIELG ANHQGEIAWT VSLTRPEAAL
VNNLAAAHLE GFGSLAGVAK AKGEIFSGLP ENGIAIMNAD NNDWLNWQSV IGSRKVWRFS
PNAANSDFTA TNIHVTSHGT EFTLQTPTGS VDVLLPLPGR HNIANALAAA ALSMSVGATL
DAIKAGLANL KAVPGRLFPI QLAENQLLLD DSYNANVGSM TAAVQVLAEM PGYRVLVVGD
MAELGAESEA CHVQVGEAAK AAGIDRVLSV GKQSHAISTA SGVGEHFADK TALITRLKLL
IAEQQVITIL VKGSRSAAME EVVRALQENG TC