| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_3463 |
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| Symbol | |
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| ID | 0 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli DH1 |
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| Kingdom | Bacteria |
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| Replicon accession | CP001637 |
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| Strand | + |
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| Start bp | 3715951 |
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| End bp | 3718548 |
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| Gene Length | 2598 bp |
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| Protein Length | 865 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | ACX41078 |
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| Protein GI | 260450656 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.93384 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTATAG AATATACTAA AAATTATCAT CATCTGACCC GTATCGCCAC GTTTTGCGCG
CTGCTGTATT GCAATACTGC TTTCAGTGCT GAACTCGTTG AATATGACCA TACCTTCCTG
ATGGGGCAGA ATGCATCTAA TATTGATCTC AGCCGGTACA GTGAAGGTAA CCCCGCTATA
CCGGGTGTTT ACGACGTCAG TGTTTATGTA AACGACCAAC CAATCATTAA CCAAAGTATT
ACATTTGTCG CAATTGAAGG AAAAAAGAAC GCCCAGGCTT GTATCACATT AAAGAATTTA
TTGCAGTTTC ATATTAATTC TCCCGATATA AATAACGAAA AAGCCGTTCT GCTTGCCAGG
GATGAAACGC TCGGCAATTG CCTCAATTTG ACGGAAATTA TCCCTCAGGC TTCTGTTCGT
TATGACGTTA ACGATCAACG TCTGGATATA GACGTTCCTC AAGCCTGGGT AATGAAAAAT
TACCAAAACT ATGTTGATCC ATCGTTATGG GAAAACGGCA TTAATGCGGC CATGTTGTCA
TACAACCTCA ACGGATATCA TAGTGAAACC CCTGGTCGAA AAAATGAAAG CATTTATGCT
GCATTTAACG GTGGGATGAA TTTAGGTGCA TGGCGACTGC GTGCCTCGGG CAACTACAAC
TGGATGACCG ATTCTGGCAG TAATTATGAT TTTAAGAATC GGTATGTTCA GCGTGATATC
GCCTCGCTGC GTTCTCAACT CATTCTTGGT GAGTCTTATA CGACGGGCGA AACCTTTGAT
TCCGTCAGTA TCCGAGGCAT TCGTTTATAC AGTGACAGCC GCATGTTGCC TCCGACTTTA
GCCAGCTTTG CGCCTATCAT TCATGGCGTT GCCAATACCA ACGCCAAAGT CACTATTACG
CAAGGTGGCT ATAAGATTTA TGAAACGACG GTGCCGCCAG GCGCTTTCGT CATTGATGAT
CTGAGTCCGT CAGGGTACGG CAGCGATCTT ATTGTTACCA TCGAAGAATC CGATGGCTCA
AAGCGGACAT TCTCGCAACC TTTCTCATCC GTTGTTCAAA TGTTACGCCC TGGCGTTGGA
CGTTGGGATA TTAGCGGCGG TCAGGTCTTA AAAGATGATA TTCAGGATGA GCCTAATTTA
TTTCAAGCAA GCTACTACTA CGGCCTGAAT AACTATCTGA CGGGTTATAC CGGTATTCAG
ATAACCGATA ATAACTATAC CGCTGGTTTG TTAGGTCTTG GTCTGAATAC TTCAGTTGGT
GCATTTTCTT TCGATGTGAC TCATTCCAAT GTTCGTATCC CGGATGATAA AACATACCAG
GGGCAAAGTT ATCGTGTTTC CTGGAACAAG TTATTCGAAG AAACAAGTAC TTCACTGAAT
ATCGCGGCCT ATCGCTATTC GACACAGAAT TACCTTGGTC TTAATGATGC ACTAACTCTA
ATTGATGAAG TGAAACATCC CGAACAAGAT CTTGAACCGA AATCCATGCG TAATTACTCA
CGCATGAAAA ATCAGGTTAC GGTCAGTATT AACCAACCGT TGAAATTTGA GAAAAAAGAT
TACGGTTCAT TTTATCTTTC CGGAAGTTGG TCCGATTACT GGGCTTCCGG ACAAAATCGT
AGCAATTACT CTATTGGCTA CAGTAACAGT ACATCCTGGG GCAGCTACAG TGTCAGTGCC
CAGCGTTCAT GGAATGAAGA CGGCGACACT GACGATAGCG TTTATCTTAG TTTCACCATT
CCAATTGAAA AATTACTTGG CACTGAACAA CGTACTTCAG GTTTCCAGAG TATTGATACT
CAAATAAGCA GTGACTTTAA GGGTAATAAC CAACTCAACG TTAGCAGCAG TGGCTATAGC
GATAACGCTC GCGTCAGTTA TAGCGTGAAT ACTGGCTATA CGATGAATAA AGCCAGCAAA
GATTTGAGTT ATGTTGGGGG TTATGCCAGC TATGAGTCAC CATGGGGAAC GCTGGCAGGT
TCAATTTCTG CAAATAGCGA TAACAGCCGT CAAGTTTCTC TCAGCACCGA CGGTGGTTTT
GTATTGCATA GCGGTGGACT GACTTTCAGT AATGATAGTT TTAGCGACTC CGATACACTG
GCGGTAGTTC AGGCTCCAGG TGCTCAAGGA GCGCGAATAA ATTATGGCAA CAGTACTATC
GATCGATGGG GTTATGGTGT CACCAGCGCT CTTTCTCCTT ATCATGAAAA CCGTATCGCG
CTGGATATCA ACGATCTTGA GAACGATGTT GAATTAAAAA GTACCAGTGC AGTAGCTGTA
CCGCGTCAGG GTTCAGTCGT CTTTGCTGAT TTTGAAACCG TGCAAGGGCA ATCAGCCATT
ATGAACATCA CACGAAGTGA TGGTAAAAAT ATTCCATTTG CTGCAGATAT TTATGATGAG
CAAGGCAATG TCATTGGTAA TGTTGGACAG GGTGGACAAG CATTTGTTCG TGGTATTGAG
CAGCAGGGAA ATATCAGCAT TAAATGGCTC GAACAAAGTA AACCCGTAAG TTGTCTTGCG
CATTATCAAC AAAGCCCAGA AGCAGAAAAA ATAGCACAAT CTATTATTCT GAATGGAATT
CGGTGTCAGA TTCAGTAA
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| Protein sequence | MTIEYTKNYH HLTRIATFCA LLYCNTAFSA ELVEYDHTFL MGQNASNIDL SRYSEGNPAI
PGVYDVSVYV NDQPIINQSI TFVAIEGKKN AQACITLKNL LQFHINSPDI NNEKAVLLAR
DETLGNCLNL TEIIPQASVR YDVNDQRLDI DVPQAWVMKN YQNYVDPSLW ENGINAAMLS
YNLNGYHSET PGRKNESIYA AFNGGMNLGA WRLRASGNYN WMTDSGSNYD FKNRYVQRDI
ASLRSQLILG ESYTTGETFD SVSIRGIRLY SDSRMLPPTL ASFAPIIHGV ANTNAKVTIT
QGGYKIYETT VPPGAFVIDD LSPSGYGSDL IVTIEESDGS KRTFSQPFSS VVQMLRPGVG
RWDISGGQVL KDDIQDEPNL FQASYYYGLN NYLTGYTGIQ ITDNNYTAGL LGLGLNTSVG
AFSFDVTHSN VRIPDDKTYQ GQSYRVSWNK LFEETSTSLN IAAYRYSTQN YLGLNDALTL
IDEVKHPEQD LEPKSMRNYS RMKNQVTVSI NQPLKFEKKD YGSFYLSGSW SDYWASGQNR
SNYSIGYSNS TSWGSYSVSA QRSWNEDGDT DDSVYLSFTI PIEKLLGTEQ RTSGFQSIDT
QISSDFKGNN QLNVSSSGYS DNARVSYSVN TGYTMNKASK DLSYVGGYAS YESPWGTLAG
SISANSDNSR QVSLSTDGGF VLHSGGLTFS NDSFSDSDTL AVVQAPGAQG ARINYGNSTI
DRWGYGVTSA LSPYHENRIA LDINDLENDV ELKSTSAVAV PRQGSVVFAD FETVQGQSAI
MNITRSDGKN IPFAADIYDE QGNVIGNVGQ GGQAFVRGIE QQGNISIKWL EQSKPVSCLA
HYQQSPEAEK IAQSIILNGI RCQIQ
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