Gene EcDH1_3462 details

Gene Information

• Locus tag: EcDH1_3462
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli DH1
• Kingdom: Bacteria
• Replicon accession: CP001637
• Strand: +
• Start bp: 3715176
• End bp: 3715916
• Gene Length: 741 bp
• Protein Length: 246 aa
• Translation table: 11
• GC content: 45%
• Product: Pili assembly chaperone, N-terminal
• Protein accession: ACX41077
• Protein GI: 260450655

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.000279745
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTTTTA ACACCAAACA TACAACAGCT TTATGCTTCG TAACCTGTAT GGCTTTTAGT 
TCATCGTCTA TTGCGGACAT TGTCATTTCG GGTACTCGCG TAATATATAA AAGCGATCAA 
AAAAGTGTCA ACGCACGTCT GGAAAATAAA GGGAATAACC CGTTGCTTGT CCAGAGTTGG 
TTAGATACTG GCGATGACAA CGCTGAGCCT GGCAGTATTA CAGTCCCTTT TACTGCTACG 
CCGCCAGTAT CGCGTATTGA TGCCAAACGT GGGCAAACAA TCAAATTAAT GTACACAGCC 
AGCACCTCAC TGCCTAAAGA CAGAGAGAGC GTGTTCTGGT TTAACGTACT GGAAGTTCCA 
CCAAAACCAG ATGCAGAAAA GGTCGCGAAT CAAAGCCTGC TGCAACTGGC ATTTCGCACA 
CGTATAAAAC TTTTCTATCG CCCGGATGGA TTGAAGGGAA ATCCCTCTGA AGCCCCGTTA 
GCCCTGAAGT GGTTCTGGTC AGGTTCAGAA GGTAAGGCGT CATTACGAGT GACCAATCCA 
ACCCCTTACT ACGTCTCTTT TAGCAGTGGT GATTTAGAAG CTAGCGGTAA ACGCTATCCG 
ATTGATGTGA AAATGATTGC ACCATTTAGT GATGAGGTCA TGAAAGTCAA TGGCCTTAAT 
GGCAAAGCGA ATTCTGCAAA AGTGCATTTT TACGCCATTA ATGACTTTGG TGGCGCAATT 
GAAGGTAATG CCAGGCTGTA A 

 

Protein sequence

MFFNTKHTTA LCFVTCMAFS SSSIADIVIS GTRVIYKSDQ KSVNARLENK GNNPLLVQSW 
LDTGDDNAEP GSITVPFTAT PPVSRIDAKR GQTIKLMYTA STSLPKDRES VFWFNVLEVP 
PKPDAEKVAN QSLLQLAFRT RIKLFYRPDG LKGNPSEAPL ALKWFWSGSE GKASLRVTNP 
TPYYVSFSSG DLEASGKRYP IDVKMIAPFS DEVMKVNGLN GKANSAKVHF YAINDFGGAI 
EGNARL