Gene EcDH1_3419 details

Gene Information

• Locus tag: EcDH1_3419
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli DH1
• Kingdom: Bacteria
• Replicon accession: CP001637
• Strand: -
• Start bp: 3662770
• End bp: 3666252
• Gene Length: 3483 bp
• Protein Length: 1160 aa
• Translation table: 11
• GC content: 55%
• Product: DNA polymerase III, alpha subunit
• Protein accession: ACX41035
• Protein GI: 260450613

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTGAAC CACGTTTCGT ACACCTGCGG GTGCACAGCG ACTACTCGAT GATCGATGGC 
CTGGCCAAAA CCGCACCGTT GGTAAAAAAG GCGGCGGCGT TGGGTATGCC AGCACTGGCG 
ATCACCGATT TCACCAACCT TTGTGGTCTG GTGAAGTTCT ACGGAGCGGG ACATGGCGCA 
GGGATTAAGC CTATCGTCGG GGCAGATTTT AACGTCCAGT GCGACCTGCT GGGTGATGAG 
TTAACCCACC TGACGGTACT GGCGGCGAAC AATACCGGCT ATCAGAATCT GACGTTGCTG 
ATCTCAAAAG CGTATCAGCG CGGGTACGGT GCCGCCGGGC CGATCATCGA TCGCGACTGG 
CTTATCGAAT TAAACGAAGG GTTGATCCTT CTTTCCGGCG GACGCATGGG CGACGTCGGA 
CGCAGTCTTT TGCGTGGTAA CAGCGCGCTG GTAGATGAGT GTGTCGCGTT TTATGAAGAA 
CACTTCCCGG ATCGCTATTT TCTCGAGCTG ATCCGCACCG GCAGGCCGGA TGAAGAAAGC 
TATCTGCACG CGGCGGTGGA ACTGGCGGAA GCGCGCGGTT TGCCCGTCGT GGCGACCAAC 
GACGTGCGCT TTATCGACAG CAGCGACTTT GACGCACACG AAATCCGCGT CGCGATCCAC 
GACGGCTTTA CCCTCGACGA TCCTAAACGC CCGCGTAACT ATTCGCCGCA GCAATATATG 
CGTAGCGAAG AGGAGATGTG TGAGCTGTTT GCCGACATCC CCGAAGCCCT TGCCAACACC 
GTTGAGATCG CCAAACGCTG TAACGTAACC GTGCGTCTTG GTGAATACTT CCTGCCGCAG 
TTCCCGACCG GGGACATGAG CACCGAAGAT TATCTGGTCA AGCGTGCAAA AGAGGGCCTG 
GAAGAGCGTC TGGCCTTTTT ATTCCCTGAT GAGGAAGAAC GTCTTAAGCG CCGCCCGGAA 
TATGACGAAC GTCTGGAGAC TGAACTTCAG GTTATCAACC AGATGGGCTT CCCGGGCTAC 
TTCCTCATCG TTATGGAATT TATCCAGTGG TCGAAAGATA ACGGCGTACC GGTAGGGCCA 
GGCCGTGGCT CCGGTGCGGG TTCACTGGTG GCCTACGCGC TGAAAATCAC CGACCTCGAT 
CCGCTGGAAT TTGACCTGCT GTTCGAACGT TTCCTTAACC CGGAACGTGT CTCCATGCCT 
GACTTCGACG TTGACTTCTG TATGGAGAAA CGCGATCAGG TTATCGAGCA CGTAGCGGAC 
ATGTACGGTC GTGATGCGGT ATCGCAGATC ATCACCTTCG GTACAATGGC GGCGAAAGCG 
GTGATCCGCG ACGTAGGCCG CGTGCTGGGG CATCCGTACG GCTTTGTCGA TCGTATCTCG 
AAACTGATCC CGCCCGATCC GGGGATGACG CTGGCGAAAG CGTTTGAAGC CGAGCCGCAG 
CTGCCGGAAA TCTACGAAGC GGATGAAGAA GTTAAGGCGC TGATCGACAT GGCGCGCAAA 
CTGGAAGGGG TCACCCGTAA CGCCGGTAAG CACGCCGGTG GGGTGGTTAT CGCGCCGACC 
AAAATTACCG ATTTTGCGCC GCTTTACTGC GATGAAGAGG GCAAACATCC GGTCACCCAG 
TTTGATAAAA GCGACGTTGA ATACGCCGGA CTGGTGAAGT TCGACTTCCT TGGTTTGCGT 
ACGCTCACCA TCATCAACTG GGCGCTGGAG ATGATCAACA AGCGGCGGGC GAAGAATGGC 
GAGCCGCCGC TGGATATCGC TGCGATCCCG CTGGATGATA AGAAAAGCTT CGACATGCTG 
CAACGCTCGG AAACCACGGC GGTATTCCAG CTTGAATCGC GCGGCATGAA GGACCTGATC 
AAGCGTCTAC AACCTGACTG CTTCGAAGAT ATGATCGCCC TAGTGGCACT GTTCCGCCCC 
GGTCCGTTGC AATCAGGGAT GGTGGATAAC TTTATCGACC GTAAACATGG TCGTGAAGAG 
ATCTCCTATC CGGACGTACA GTGGCAGCAT GAAAGCCTGA AACCGGTACT GGAGCCAACC 
TACGGCATTA TCCTGTATCA GGAACAGGTC ATGCAGATTG CGCAGGTGCT TTCTGGTTAT 
ACCCTCGGTG GCGCGGATAT GCTGCGTCGT GCGATGGGTA AGAAAAAGCC GGAAGAGATG 
GCTAAGCAAC GTTCTGTATT TGCTGAAGGT GCAGAAAAGA ACGGAATCAA CGCTGAACTG 
GCGATGAAAA TCTTCGACCT GGTGGAGAAA TTCGCTGGTT ACGGATTTAA CAAATCGCAC 
TCTGCGGCCT ATGCTTTGGT GTCATATCAA ACGTTATGGC TGAAAGCGCA CTATCCTGCG 
GAGTTTATGG CGGCGGTAAT GACCGCCGAT ATGGACAACA CCGAGAAGGT GGTGGGTCTG 
GTGGATGAGT GCTGGCGGAT GGGGCTGAAA ATCCTGCCAC CAGATATAAA CTCCGGTCTT 
TACCATTTCC ACGTCAACGA CGACGGCGAA ATCGTGTATG GTATTGGCGC GATCAAAGGG 
GTCGGTGAAG GTCCGATTGA GGCCATCATC GAAGCCCGTA ATAAAGGCGG CTACTTCCGC 
GAACTGTTTG ATCTCTGCGC CCGTACCGAC ACCAAAAAGT TGAACCGTCG CGTGCTGGAA 
AAACTGATCA TGTCCGGGGC GTTTGACCGT CTTGGGCCAC ATCGCGCAGC GCTGATGAAC 
TCGCTGGGCG ATGCGTTAAA AGCGGCAGAT CAACACGCGA AAGCGGAAGC TATCGGTCAG 
GCCGATATGT TCGGCGTGCT GGCCGAAGAG CCGGAACAAA TTGAACAATC CTACGCCAGC 
TGCCAACCGT GGCCGGAGCA GGTGGTATTA GATGGGGAAC GTGAAACGTT AGGCCTGTAC 
CTGACCGGAC ACCCTATCAA CCAGTATTTA AAAGAGATTG AGCGTTATGT CGGAGGCGTA 
AGGCTGAAAG ACATGCACCC GACAGAACGT GGTAAAGTCA TCACGGCTGC GGGGCTCGTT 
GTTGCCGCGC GGGTTATGGT CACCAAGCGC GGCAATCGTA TCGGTATCTG CACGCTGGAT 
GACCGTTCCG GGCGGCTGGA AGTGATGTTG TTTACTGACG CCCTGGATAA ATACCAGCAA 
TTGCTGGAAA AAGACCGCAT ACTTATCGTC AGCGGACAGG TCAGCTTTGA TGACTTCAGC 
GGTGGGCTTA AAATGACCGC TCGCGAAGTG ATGGATATTG ACGAAGCCCG GGAAAAATAT 
GCTCGCGGGC TTGCTATCTC GCTGACGGAC AGGCAAATTG ATGACCAGCT TTTAAACCGA 
CTCCGTCAGT CTCTGGAACC CCACCGCTCT GGGACAATTC CAGTACATCT CTACTATCAG 
AGGGCGGATG CACGCGCGCG GTTGCGTTTT GGCGCGACGT GGCGTGTCTC TCCGAGCGAT 
CGTTTATTAA ACGATCTCCG TGGCCTCATT GGTTCGGAGC AGGTGGAACT GGAGTTTGAC 
TAA 

 

Protein sequence

MSEPRFVHLR VHSDYSMIDG LAKTAPLVKK AAALGMPALA ITDFTNLCGL VKFYGAGHGA 
GIKPIVGADF NVQCDLLGDE LTHLTVLAAN NTGYQNLTLL ISKAYQRGYG AAGPIIDRDW 
LIELNEGLIL LSGGRMGDVG RSLLRGNSAL VDECVAFYEE HFPDRYFLEL IRTGRPDEES 
YLHAAVELAE ARGLPVVATN DVRFIDSSDF DAHEIRVAIH DGFTLDDPKR PRNYSPQQYM 
RSEEEMCELF ADIPEALANT VEIAKRCNVT VRLGEYFLPQ FPTGDMSTED YLVKRAKEGL 
EERLAFLFPD EEERLKRRPE YDERLETELQ VINQMGFPGY FLIVMEFIQW SKDNGVPVGP 
GRGSGAGSLV AYALKITDLD PLEFDLLFER FLNPERVSMP DFDVDFCMEK RDQVIEHVAD 
MYGRDAVSQI ITFGTMAAKA VIRDVGRVLG HPYGFVDRIS KLIPPDPGMT LAKAFEAEPQ 
LPEIYEADEE VKALIDMARK LEGVTRNAGK HAGGVVIAPT KITDFAPLYC DEEGKHPVTQ 
FDKSDVEYAG LVKFDFLGLR TLTIINWALE MINKRRAKNG EPPLDIAAIP LDDKKSFDML 
QRSETTAVFQ LESRGMKDLI KRLQPDCFED MIALVALFRP GPLQSGMVDN FIDRKHGREE 
ISYPDVQWQH ESLKPVLEPT YGIILYQEQV MQIAQVLSGY TLGGADMLRR AMGKKKPEEM 
AKQRSVFAEG AEKNGINAEL AMKIFDLVEK FAGYGFNKSH SAAYALVSYQ TLWLKAHYPA 
EFMAAVMTAD MDNTEKVVGL VDECWRMGLK ILPPDINSGL YHFHVNDDGE IVYGIGAIKG 
VGEGPIEAII EARNKGGYFR ELFDLCARTD TKKLNRRVLE KLIMSGAFDR LGPHRAALMN 
SLGDALKAAD QHAKAEAIGQ ADMFGVLAEE PEQIEQSYAS CQPWPEQVVL DGERETLGLY 
LTGHPINQYL KEIERYVGGV RLKDMHPTER GKVITAAGLV VAARVMVTKR GNRIGICTLD 
DRSGRLEVML FTDALDKYQQ LLEKDRILIV SGQVSFDDFS GGLKMTAREV MDIDEAREKY 
ARGLAISLTD RQIDDQLLNR LRQSLEPHRS GTIPVHLYYQ RADARARLRF GATWRVSPSD 
RLLNDLRGLI GSEQVELEFD