Gene EcDH1_3417 details

Gene Information

• Locus tag: EcDH1_3417
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli DH1
• Kingdom: Bacteria
• Replicon accession: CP001637
• Strand: -
• Start bp: 3659558
• End bp: 3661699
• Gene Length: 2142 bp
• Protein Length: 713 aa
• Translation table: 11
• GC content: 51%
• Product: Lysine decarboxylase
• Protein accession: ACX41033
• Protein GI: 260450611

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACATCA TTGCCATTAT GGGACCGCAT GGCGTCTTTT ATAAAGATGA GCCCATCAAA 
GAACTGGAGT CGGCGCTGGT GGCGCAAGGC TTTCAGATTA TCTGGCCACA AAACAGCGTT 
GATTTGCTGA AATTTATCGA GCATAACCCT CGAATTTGCG GCGTGATTTT TGACTGGGAT 
GAGTACAGTC TCGATTTATG TAGCGATATC AATCAGCTTA ATGAATATCT CCCGCTTTAT 
GCCTTCATCA ACACCCACTC GACGATGGAT GTCAGCGTGC AGGATATGCG GATGGCGCTC 
TGGTTTTTTG AATATGCGCT GGGGCAGGCG GAAGATATCG CCATTCGTAT GCGTCAGTAC 
ACCGACGAAT ATCTTGATAA CATTACACCG CCGTTCACGA AAGCCTTGTT TACCTACGTC 
AAAGAGCGGA AGTACACCTT TTGTACGCCG GGGCATATGG GCGGCACCGC ATATCAAAAA 
AGCCCGGTTG GCTGTCTGTT TTATGATTTT TTCGGCGGGA ATACTCTTAA GGCTGATGTC 
TCTATTTCGG TCACCGAGCT TGGTTCGTTG CTCGACCACA CCGGGCCACA CCTGGAAGCG 
GAAGAGTACA TCGCGCGGAC TTTTGGCGCG GAACAGAGTT ATATCGTTAC CAACGGAACA 
TCGACGTCGA ACAAAATTGT GGGTATGTAC GCCGCGCCAT CCGGCAGTAC GCTGTTGATC 
GACCGCAATT GTCATAAATC GCTGGCGCAT CTGTTGATGA TGAACGATGT AGTGCCAGTC 
TGGCTGAAAC CGACGCGTAA TGCGTTGGGG ATTCTTGGTG GGATCCCGCG CCGTGAATTT 
ACTCGCGACA GCATCGAAGA GAAAGTCGCT GCTACCACGC AAGCACAATG GCCGGTTCAT 
GCGGTGATCA CCAACTCCAC CTATGATGGC TTGCTCTACA ACACCGACTG GATCAAACAG 
ACGCTGGATG TCCCGTCGAT TCACTTCGAT TCTGCCTGGG TGCCGTACAC CCATTTTCAT 
CCGATCTACC AGGGTAAAAG TGGTATGAGC GGCGAGCGTG TTGCGGGAAA AGTGATCTTC 
GAAACGCAAT CGACCCACAA AATGCTGGCG GCGTTATCGC AGGCTTCGCT GATCCACATT 
AAAGGCGAGT ATGACGAAGA GGCCTTTAAC GAAGCCTTTA TGATGCATAC CACCACCTCG 
CCCAGTTATC CCATTGTTGC TTCGGTTGAG ACGGCGGCGG CGATGCTGCG TGGTAATCCG 
GGCAAACGGC TGATTAACCG TTCAGTAGAA CGAGCTCTGC ATTTTCGCAA AGAGGTCCAG 
CGGCTGCGGG AAGAGTCTGA CGGTTGGTTT TTCGATATCT GGCAACCGCC GCAGGTGGAT 
GAAGCCGAAT GCTGGCCCGT TGCGCCTGGC GAACAGTGGC ACGGCTTTAA CGATGCGGAT 
GCCGATCATA TGTTTCTCGA TCCGGTTAAA GTCACTATTT TGACACCGGG GATGGACGAG 
CAGGGCAATA TGAGCGAGGA GGGGATCCCG GCGGCGCTGG TAGCAAAATT CCTCGACGAA 
CGTGGGATCG TAGTAGAGAA AACCGGCCCT TATAACCTGC TGTTTCTCTT TAGTATTGGC 
ATCGATAAAA CCAAAGCAAT GGGATTATTG CGTGGGTTGA CGGAATTCAA ACGCTCTTAC 
GATCTCAACC TGCGGATCAA AAATATGCTA CCCGATCTCT ATGCAGAAGA TCCCGATTTC 
TACCGCAATA TGCGTATTCA GGATCTGGCA CAAGGGATCC ATAAGCTGAT TCGTAAACAC 
GATCTTCCCG GTTTGATGTT GCGGGCATTC GATACTTTGC CGGAGATGAT CATGACGCCA 
CATCAGGCAT GGCAACGACA AATTAAAGGC GAAGTAGAAA CCATTGCGCT GGAACAACTG 
GTCGGTAGAG TATCGGCAAA TATGATCCTG CCTTATCCAC CGGGCGTACC GCTGTTGATG 
CCTGGAGAAA TGCTGACCAA AGAGAGCCGC ACAGTACTCG ATTTTCTACT GATGCTTTGT 
TCCGTCGGGC AACATTACCC CGGTTTTGAA ACGGATATTC ACGGCGCGAA ACAGGACGAA 
GACGGCGTTT ACCGCGTACG AGTCCTAAAA ATGGCGGGAT AA 

 

Protein sequence

MNIIAIMGPH GVFYKDEPIK ELESALVAQG FQIIWPQNSV DLLKFIEHNP RICGVIFDWD 
EYSLDLCSDI NQLNEYLPLY AFINTHSTMD VSVQDMRMAL WFFEYALGQA EDIAIRMRQY 
TDEYLDNITP PFTKALFTYV KERKYTFCTP GHMGGTAYQK SPVGCLFYDF FGGNTLKADV 
SISVTELGSL LDHTGPHLEA EEYIARTFGA EQSYIVTNGT STSNKIVGMY AAPSGSTLLI 
DRNCHKSLAH LLMMNDVVPV WLKPTRNALG ILGGIPRREF TRDSIEEKVA ATTQAQWPVH 
AVITNSTYDG LLYNTDWIKQ TLDVPSIHFD SAWVPYTHFH PIYQGKSGMS GERVAGKVIF 
ETQSTHKMLA ALSQASLIHI KGEYDEEAFN EAFMMHTTTS PSYPIVASVE TAAAMLRGNP 
GKRLINRSVE RALHFRKEVQ RLREESDGWF FDIWQPPQVD EAECWPVAPG EQWHGFNDAD 
ADHMFLDPVK VTILTPGMDE QGNMSEEGIP AALVAKFLDE RGIVVEKTGP YNLLFLFSIG 
IDKTKAMGLL RGLTEFKRSY DLNLRIKNML PDLYAEDPDF YRNMRIQDLA QGIHKLIRKH 
DLPGLMLRAF DTLPEMIMTP HQAWQRQIKG EVETIALEQL VGRVSANMIL PYPPGVPLLM 
PGEMLTKESR TVLDFLLMLC SVGQHYPGFE TDIHGAKQDE DGVYRVRVLK MAG