Gene EcDH1_3406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3406 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3651383 
End bp3651787 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content53% 
IMG OID 
Productouter membrane lipoprotein 
Protein accessionACX41022 
Protein GI260450600 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000000353754 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGCTT TACCGATCTG TTTAGTAGCA CTCATGCTAA GCGGCTGTTC CATGTTAAGC 
AGATCCCCTG TCGAACCCGT TCAAAGCACT GCACCCCAGC CGAAAGCGGA GCCTGCAAAA
CCGAAAGCGC CGCGCGCCAC GCCGGTCCGA ATTTATACCA ATGCAGAAGA ATTAGTCGGC
AAACCGTTCC GCGATCTCGG TGAAGTCAGT GGCGACTCTT GCCAGGCCTC TAATCAGGAC
TCTCCGCCGA GCATTCCAAC CGCACGTAAG CGGATGCAAA TCAACGCCTC TAAAATGAAA
GCCAATGCTG TATTACTGCA TAGCTGCGAA GTCACCAGCG GTACGCCAGG CTGCTATCGT
CAGGCTGTAT GTATCGGTTC TGCGCTTAAC ATTACGGCGA AATGA
 
Protein sequence
MRALPICLVA LMLSGCSMLS RSPVEPVQST APQPKAEPAK PKAPRATPVR IYTNAEELVG 
KPFRDLGEVS GDSCQASNQD SPPSIPTARK RMQINASKMK ANAVLLHSCE VTSGTPGCYR
QAVCIGSALN ITAK