Gene EcDH1_3400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3400 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3640497 
End bp3641411 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content50% 
IMG OID 
Producttranscriptional regulator, LysR family 
Protein accessionACX41016 
Protein GI260450594 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCCA CGTCGGAAGA ACTCGCCATT TTTGTTTCGG TCGTCGAAAG CGGCAGCTTT 
AGCCGGGCAG CGGAACAATT AGGGCAAGCA AACTCAGCGG TAAGCCGGGC GGTGAAAAAG
CTGGAGATGA AACTTGGCGT TAGCCTGCTT AATCGGACCA CGCGACAACT TAGCCTGACG
GAAGAAGGCG AGCGTTATTT TCGTCGCGTA CAGTCAATTT TGCAGGAGAT GGCAGCGGCA
GAATCAGAAA TTATGGAGAC GCGTAATACA CCGCGTGGAC TGTTACGGAT CGATGCCGCA
ACTCCAGTGG TGCTGCACTT TCTGATGCCG TTAATTAAGC CTTTCCGTGA ACGCTATCCG
GAAGTCACTT TGTCGCTAGT CTCCTCCGAA ACGATTATTA ATTTGATCGA AAGAAAAGTG
GATGTCGCGA TACGCGCTGG TACGTTAACG GATTCCAGCT TACGTGCCAG GCCGTTATTT
AACAGTTATC GAAAAATTAT CGCCTCCCCC GATTATATTT CCCGCTACGG GAAGCCAGAA
ACGATCGACG ATTTAAAGCA ACATATTTGC CTGGGATTCA CTGAACCCGC TTCCCTCAAT
ACCTGGCCGA TAGCCCGTAG CGATGGACAA TTACATGAGG TGAAGTACGG TTTGTCATCC
AATAGTGGGG AAACACTGAA ACAGCTTTGC CTGAGTGGCA ACGGGATTGC GTGTTTGTCC
GACTACATGA TCGACAAAGA AATCGCTCGC GGAGAATTGG TGGAGTTAAT GGCAGATAAA
GTGTTGCCAG TGGAAATGCC ATTCAGTGCC GTCTATTACA GCGACCGTGC GGTAAGTACG
CGCATCCGGG CTTTTATCGA TTTCCTTAGC GAGCATGTAA AAACAGCTCC CGGAGGAGCT
GTCAGAGAGG CTTAA
 
Protein sequence
MKATSEELAI FVSVVESGSF SRAAEQLGQA NSAVSRAVKK LEMKLGVSLL NRTTRQLSLT 
EEGERYFRRV QSILQEMAAA ESEIMETRNT PRGLLRIDAA TPVVLHFLMP LIKPFRERYP
EVTLSLVSSE TIINLIERKV DVAIRAGTLT DSSLRARPLF NSYRKIIASP DYISRYGKPE
TIDDLKQHIC LGFTEPASLN TWPIARSDGQ LHEVKYGLSS NSGETLKQLC LSGNGIACLS
DYMIDKEIAR GELVELMADK VLPVEMPFSA VYYSDRAVST RIRAFIDFLS EHVKTAPGGA
VREA