Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_3378 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | + |
Start bp | 3621281 |
End bp | 3623020 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | type III secretion FHIPEP protein |
Protein accession | ACX40997 |
Protein GI | 260450575 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTTCAC GCTCGGATTT ACTGACGCTG TTGACAATCA ACTTTATTGT CGTCACCAAA GGGGCCGAGC GTATTTCCGA GGTTTCTGCC CGCTTTACCT TAGACGCGAT GCCCGGCAAA CAGATGGCGA TTGACGCCGA TCTTAACGCC GGATTGATCA ACCAGGCGCA GGCGCAAACC CGGCGTAAAG ATGTTGCCAG CGAGGCCGAT TTCTACGGCG CGATGGACGG GGCATCGAAG TTTGTGCGCG GGGACGCCAT CGCCGGGATG ATGATTCTGG CGATCAACCT GATCGGCGGC GTCTGTATCG GGATCTTCAA ATACAACCTG AGCGCCGATG CTGCCTTCCA GCAGTATGTG CTGATGACCA TCGGCGACGG CCTGGTGGCG CAGATCCCTT CCCTGCTGCT CTCCACCGCG GCGGCGATTA TCGTCACCCG CGTCAGCGAC AACGGCGATA TCGCCCATGA CGTGCGTAAC CAGCTGCTGG CAAGCCCGTC GGTGCTCTAC ACCGCCACCG GGATTATGTT CGTGCTGGCG GTGGTACCGG GAATGCCGCA CCTGCCGTTT TTGCTGTTCA GCGCCCTGCT TGGTTTTACC GGCTGGCGGA TGAGCAAACA GCCGCTGGCG GCGGAGGCGG AAGAGAAAAG CCTCGAAACG CTGACCCGCA CCATCACCGA AACCAGCGAG CAGCAGGTCA GTTGGGAAAC CATTCCGCTG ATCGAGCCTA TCAGTTTAAG CCTCGGTTAC AAACTGGTGG CGCTGGTGGA CAAAGCACAG GGTAACCCGC TCACCCAGCG GATTCGCGGC GTGCGGCAGG TGATTTCTGA CGGCAACGGC GTGCTGCTGC CGGAGATCCG CATTCGGGAA AACTTCCGCC TTAAGCCCAG TCAGTACGCC ATTTTCATCA ACGGCATAAA GGCTGATGAA GCGGATATTC CGGCGGATAA ACTGATGGCC CTGCCCTCCA GCGAAACCTA CGGCGAGATT GACGGCGTGC AGGGGAACGA CCCGGCGTAC GGGATGCCGG TCACCTGGAT CCAGGCGGCG CAGAAAGCGA AGGCGCTGAA TATGGGGTAT CAGGTGATCG ACAGCGCCAG CGTGATCGCT ACCCATGTAA ATAAGATTGT GCGCAGCTAT ATTCCTGATT TGTTTAACTA TGATGATATT ACGCAGTTGC ATAACCGTTT ATCGTCGACG GCACCGCGTC TGGCGGAAGA TTTGAGCGCG GCGCTCAATT ACAGCCAGTT GCTGAAAGTG TACCGGGCGC TGCTGACCGA AGGCGTTTCC CTGCGCGATA TCGTCACCAT CGCCACCGTG CTGGTCGCCA GTAGCACGGT GACGAAAGAT CATATTCTGC TGGCGGCCGA TGTGCGCCTG GCATTGCGGC GCAGCATTAC CCATCCGTTC GTTCGCAAGC AGGAGCTGAC GGTGTATACG CTGAATAATG AGCTGGAAAA TCTGCTGACC AACGTGGTGA ATCAGGCGCA ACAGGGCGGG AAAGTGATGC TCGACAGCGT GCCGGTCGAT CCGAATATGC TCAACCAGTT CCAGAGTACG ATGCCACAGG TGAAAGAGCA GATGAAAGCG GCGGGGAAAG ACCCGGTGCT GCTGGTGCCA CCGCAGCTGC GCCCTTTGCT GGCGCGTTAT GCAAGGTTGT TTGCGCCGGG GCTGCATGTG CTGTCGTATA ACGAAGTGCC GGATGAGCTG GAGTTGAAGA TTATGGGGGC GTTGATGTAA
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Protein sequence | MLSRSDLLTL LTINFIVVTK GAERISEVSA RFTLDAMPGK QMAIDADLNA GLINQAQAQT RRKDVASEAD FYGAMDGASK FVRGDAIAGM MILAINLIGG VCIGIFKYNL SADAAFQQYV LMTIGDGLVA QIPSLLLSTA AAIIVTRVSD NGDIAHDVRN QLLASPSVLY TATGIMFVLA VVPGMPHLPF LLFSALLGFT GWRMSKQPLA AEAEEKSLET LTRTITETSE QQVSWETIPL IEPISLSLGY KLVALVDKAQ GNPLTQRIRG VRQVISDGNG VLLPEIRIRE NFRLKPSQYA IFINGIKADE ADIPADKLMA LPSSETYGEI DGVQGNDPAY GMPVTWIQAA QKAKALNMGY QVIDSASVIA THVNKIVRSY IPDLFNYDDI TQLHNRLSST APRLAEDLSA ALNYSQLLKV YRALLTEGVS LRDIVTIATV LVASSTVTKD HILLAADVRL ALRRSITHPF VRKQELTVYT LNNELENLLT NVVNQAQQGG KVMLDSVPVD PNMLNQFQST MPQVKEQMKA AGKDPVLLVP PQLRPLLARY ARLFAPGLHV LSYNEVPDEL ELKIMGALM
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