| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_3340 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 3591792 |
|---|
| End bp | 3592130 |
|---|
| Gene Length | 339 bp |
|---|
| Protein Length | 112 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | |
|---|
| Product | transposase IS3/IS911 family protein |
|---|
| Protein accession | ACX40962 |
|---|
| Protein GI | 260450540 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.0763009 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGTA AGCGTTATCC CGAAGAGTTT AAAACTGAAG CAGTCAAACA GGTTGTTGAT
CTCGGTTATT CTGTTGCCAG CGTTGCAACA CGTCTCGATA TCACCACCCA CAGCCTTTAT
GCCTGGATAA AGAAGTACGG TCCGGATTCT TCCACTAATA AAGAACAGTC AGATGCTCAG
GCCGAGATCC GCCGTCTCCA GAAAGAGCTG AAACGGGTTA CCGACGAACG GGACATATTA
AAAAAAGCTG CTGTAGATTC AATCTGTCAA TGCAACACCC CTTTCAATTA TCTCTTTCGG
TGTTTTGAAC TTCAGTGTCT TTCTCGGTCT GTTGTTTAG
|
|---|
| Protein sequence | MSGKRYPEEF KTEAVKQVVD LGYSVASVAT RLDITTHSLY AWIKKYGPDS STNKEQSDAQ
AEIRRLQKEL KRVTDERDIL KKAAVDSICQ CNTPFNYLFR CFELQCLSRS VV
|
|---|
| |