Gene EcDH1_3325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3325 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3575942 
End bp3576922 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content55% 
IMG OID 
Producttransposase IS4 family protein 
Protein accessionACX40949 
Protein GI260450527 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCATC AACTTACCTT CGCCGACAGT GAATTCAGCA GTAAGCGCCG TCAGACCAGA 
AAAGAGATTT TCTTGTCCCG CATGGAGCAG ATTCTGCCAT GGCAAAACAT GGTGGAAGTC
ATCGAGCCGT TTTACCCCAA GGCTGGTAAT GGCCGGCGAC CTTATCCGCT GGAAACCATG
CTACGCATTC ACTGCATGCA GCATTGGTAC AACCTGAGCG ATGGCGCGAT GGAAGATGCT
CTGTACGAAA TCGCCTCCAT GCGTCTGTTT GCCCGGTTAT CCCTGGATAG CGCCTTGCCG
GACCGCACCA CCATCATGAA TTTCCGCCAC CTGCTGGAGC AGCATCAACT GGCCCGCCAA
TTGTTCAAGA CCATCAATCG CTGGCTGGCC GAAGCAGGCG TCATGATGAC TCAAGGCACC
TTGGTCGATG CCACCATCAT TGAGGCACCC AGCTCGACCA AGAACAAAGA GCAGCAACGC
GATCCGGAGA TGCATCAGAC CAAGAAAGGC AATCAGTGGC ACTTTGGCAT GAAGGCCCAC
ATTGGTGTCG ATGCCAAGAG TGGCCTGACC CACAGCCTGG TCACCACCGC GGCCAACGAG
CATGACCTCA ATCAGCTGGG TAATCTGCTG CATGGAGAGG AGCAATTTGT CTCAGCCGAT
GCCGGCTACC AAGGGGCGCC ACAGCGCGAG GAGCTGGCCG AGGTGGATGT GGACTGGCTG
ATCGCCGAGC GCCCCGGCAA GGTAAGAACC TTGAAACAGC ATCCACGCAA GAACAAAACG
GCCATCAACA TCGAATACAT GAAAGCCAGC ATCCGGGCCA GGGTGGAGCA CCCATTTCGC
ATCATCAAGC GACAGTTCGG CTTCGTGAAA GCCAGATACA AGGGGTTGCT GAAAAACGAT
AACCAACTGG CGATGTTATT CACGCTGGCC AACCTGTTTC GGGCGGACCA AATGATACGT
CAGTGGGAGA GATCTCACTA A
 
Protein sequence
MSHQLTFADS EFSSKRRQTR KEIFLSRMEQ ILPWQNMVEV IEPFYPKAGN GRRPYPLETM 
LRIHCMQHWY NLSDGAMEDA LYEIASMRLF ARLSLDSALP DRTTIMNFRH LLEQHQLARQ
LFKTINRWLA EAGVMMTQGT LVDATIIEAP SSTKNKEQQR DPEMHQTKKG NQWHFGMKAH
IGVDAKSGLT HSLVTTAANE HDLNQLGNLL HGEEQFVSAD AGYQGAPQRE ELAEVDVDWL
IAERPGKVRT LKQHPRKNKT AINIEYMKAS IRARVEHPFR IIKRQFGFVK ARYKGLLKND
NQLAMLFTLA NLFRADQMIR QWERSH