Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_3323 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | + |
Start bp | 3573934 |
End bp | 3575259 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | |
Product | integrase family protein |
Protein accession | ACX40947 |
Protein GI | 260450525 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCTTT CAAGACAAAA ATTTACCTTC GAAAGACTTC GCAGATTCAC CTTACCGGAA GGGAAAAAAC AAACTTTTCT TTGGGATGCA GATGTAACAA CCCTGGCATG CCGAGCAACT AGCGGAGCAA AAGCCTTTGT ATTCCAAAGC GTATATGCGG GGAAAACCCT TCGCATGACT ATTGGCAACA TTAACGACTG GAAGATTGAT GATGCGAGAG CCGAGGCAAG ACGGTTACAA ACATTGATCG ATACAGGGAT AGATCCACGA ATTGCTAAGG CTGTAAAAAT CGCAGAAGCA GAATCCCTGC AGGCAGAATC ACGTAAAACA AAAGTGACTT TCTCCGTCGC CTGGGAAGAC TATCTTCAAG AATTGAGAAC CGGTATCAGT GCAAAAACTA AACGCCCATA TTCTACTCGA TACATTGCCG ATCACATTAA CTTGTCCAGT CGTGGAGGCG AAAGTAAAAA AAGAGGCCAA GGCCCGACTT CGGCTGGACC ATTGGCTAGT TTGCTCAACC TGCCGTTATC GGAGCTAACC CCAGATTACA TAGCAGCGTG GCTGAGTACA GAAAGGCAAA ATAGACCTAC CGTCACTGCT CACGCTTATC GCCTACTACG TGCTTTCATC AAATGGAGTA ATTATCAGAA AAAATATCAA GGGATCATTC CTGGCGATCT GGCACAAGAT TACAACGTAA GAAAAATGGT TCCCGTGTCA GCGAGTAAAG CTGATGATTG CCTGCAAAAG GAACAACTAA AAAGCTGGTT TAGTGCCGTG CGTAGCCTCA ATAATCCTAT TGCATCGGCC TATCTCCAAG TACTTTTGCT CACTGGTGCT CGGCGTGAAG AAATTGCGTC GCTTCGCTGG TCAGACGTAG ATTTCAAATG GTCAAGCATG CGAATTAAAG ACAAGATCGA AGGTGAACGT ATCATCCCTC TCACTCCTTA TGTTTCTGAA TTGTTAAATG TACTAGCGCA ATCCCCAAAT TCTGACGTAA ATAAGGAGGG TTGGGTTTTC AGAAGTAACA GTAAAAGTGG CAAAATTATT GAGCCGCGTT CAGCGCACAA CAGAGCATTA GTGCTGGCTG AGTTACCACA TATCAGCCTT CACGGTTTAC GTCGTAGTTT TGGTACTTTG GCCGAGTGGG TTGAAGTTCC CACTGGTATT GTTGCTCAAA TTATGGGACA CAAACCCAGC GCTCTTGCCG AAAAACACTA TCGCCGTCGT CCGTTAGATC TGTTACGAAA ATGGCACGAG AAAATTGAGA CATGGATCTT AAATGAAGCA GGTATTACCA TAAAAAACAA CGTTGATATG CGTTGA
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Protein sequence | MALSRQKFTF ERLRRFTLPE GKKQTFLWDA DVTTLACRAT SGAKAFVFQS VYAGKTLRMT IGNINDWKID DARAEARRLQ TLIDTGIDPR IAKAVKIAEA ESLQAESRKT KVTFSVAWED YLQELRTGIS AKTKRPYSTR YIADHINLSS RGGESKKRGQ GPTSAGPLAS LLNLPLSELT PDYIAAWLST ERQNRPTVTA HAYRLLRAFI KWSNYQKKYQ GIIPGDLAQD YNVRKMVPVS ASKADDCLQK EQLKSWFSAV RSLNNPIASA YLQVLLLTGA RREEIASLRW SDVDFKWSSM RIKDKIEGER IIPLTPYVSE LLNVLAQSPN SDVNKEGWVF RSNSKSGKII EPRSAHNRAL VLAELPHISL HGLRRSFGTL AEWVEVPTGI VAQIMGHKPS ALAEKHYRRR PLDLLRKWHE KIETWILNEA GITIKNNVDM R
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