| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_3317 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 3567350 |
|---|
| End bp | 3567964 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF1440 |
|---|
| Protein accession | ACX40941 |
|---|
| Protein GI | 260450519 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATAT TTGAACAAAC TCCACCGAAC CGCAGACGTT ATGGTCTTGC TGCATTCATT
GGGCTGATTG CTGGCGTTGT TTCCGCATTC GTGAAGTGGG GGGCTGAAGT TCCATTGCCG
CCACGTAGCC CGGTGGATAT GTTTAATGCA GCGTGTGGCC CGGAATCATT AATCAGGGCT
GCAGGCCAAA TTGATTGCTC GCGTAATTTT CTCAATCCAC CGTATATTTT TCTTCGAGAC
TGGTTGGGGC TGACAGATCC CAATGCGGCT GTTTATACCT TTGCCGGGCA TGTCTTTAAC
TGGGTTGGTG TTACGCACAT TATCTTTTCG ATAGTGTTTG CTGTCGGTTA TTGTGTGGTC
GCTGAAGTAT TTCCAAAAAT TAAACTCTGG CAGGGCTTAC TGGCAGGTGC TTTAGCCCAA
CTTTTTGTTC ATATGATTTC ATTCCCTCTC ATGGGACTGA CGCCACCTCT GTTTGATCTC
CCGTGGTATG AGAATGTTTC TGAAATTTTT GGACATTTAG TCTGGTTCTG GTCTATTGAA
ATTATTCGCA AAGATTTACG AAACAGAATT ACTCATGAGC CAGACCCTGA GATCCCTTTA
GGCTCAAACA GATAA
|
|---|
| Protein sequence | MNIFEQTPPN RRRYGLAAFI GLIAGVVSAF VKWGAEVPLP PRSPVDMFNA ACGPESLIRA
AGQIDCSRNF LNPPYIFLRD WLGLTDPNAA VYTFAGHVFN WVGVTHIIFS IVFAVGYCVV
AEVFPKIKLW QGLLAGALAQ LFVHMISFPL MGLTPPLFDL PWYENVSEIF GHLVWFWSIE
IIRKDLRNRI THEPDPEIPL GSNR
|
|---|
| |