Gene EcDH1_3313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3313 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3561623 
End bp3564148 
Gene Length2526 bp 
Protein Length841 aa 
Translation table11 
GC content55% 
IMG OID 
Productconserved hypothetical protein 
Protein accessionACX40937 
Protein GI260450515 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTTAC GACGGTTCTC CCCAGGACTG AAAGCCCAGT TTGCCTTCGG CATGGTCTTT 
TTGTTCGTTC AGCCCGATGC CAGCGCTGCT GACATAAGTG CGCAGCAAAT AGGTGGGGTG
ATTATTCCGC AGGCCTTCAG TCAGGCGCTT CAGGACGGCA TGAGCGTCCC GCTCTATATT
CATCTCGCCG GTAGCCAGGG TCGCCAGGAC GATCAGCGAA TCGGCAGCGC TTTTATCTGG
CTGGACGATG GACAGCTACG CATCCGGAAA ATACAGCTGG AAGAGAGTGA AGATAACGCC
AGTGTCAGCG AACAAACTCG ACAGCAGCTG ATGGCTCTGG CCAACGCCCC GTTCAATGAG
GCCCTTACCA TCCCCCTGAC TGACAACGCG CAGCTGGATC TCAGCTTGCG CCAACTGCTG
CTGCAGCTAG TGGTCAAGCG CGAAGCGCTG GGCACCGTAC TACGCTCACG TAGCGAAGAC
ATCGGGCAGT CCAGTGTTAA CACCCTCAGC AGTAATCTGA GCTATAACTT GGGCGTCTAT
AACAACCAGT TGCGTAACGG CGGGAGCAAC ACATCCAGCT ATCTGTCGCT GAATAACGTT
ACTGCACTGC GCGAACATCA TGTGGTGCTC GACGGCTCGC TGTACGGGAT CGGTAGCGGT
CAACAGGACA GTGAATTATA TAAAGCGATG TATGAACGCG ATTTTGCCGG TCACCGATTT
GCCGGTGGAA TGCTCGACAC CTGGAACTTG CAGTCCTTAG GGCCGATGAC CGCCATTTCA
GCAGGGAAGA TTTACGGCCT TTCCTGGGGA AACCAGGCCA GCTCCACCAT CTTCGACAGC
AGCCAGTCAG CCACGCCAGT GATCGCCTTT TTACCGGCGG CGGGCGAAGT ACATCTCACC
CGTGATGGGC GGCTACTAAG CGTTCAGAAC TTCACTATGG GCAATCATGA AGTGGATACC
CGGGGTCTAC CGTACGGGAT TTACGATGTG GAAGTTGAGG TGATCGTTAA CGGTCGCGTG
ATCAGCAAAC GCACCCAGCG GGTCAATAAG CTGTTTAGCC GGGGGCGCGG CGTCGGTGCA
CCACTGGCGT GGCAGGTATG GGGCGGTAGC TTTCATATGG ATCGCTGGTC GGAAAACGGG
AAAAAGACGC GACCAGCTAA AGAGAGTTGG CTAGCAGGTG CCTCGACCTC CGGCTCATTG
AGTACGCTTA GCTGGGCGGC AACGGGATAT GGATACGATA ATCAGGCGGT GGGTGAAACC
CGTCTGACGC TGCCGCTTGG GGGGGCGATC AACGTTAACC TGCAAAATAT GCTGGCCAGT
GACAGCTCAT GGAGCAGCAT CGGCAGCATC AGCGCCACTC TACCGGGAGG CTTTAGTTCG
CTGTGGGTTA ATCAGGAAAA AACCCGCATT GGCAATCAAT TGCGACGTAG CGATGCCGAC
AACCGTGCAA TCGGCGGCAC ACTCAACCTG AACTCACTGT GGTCGAAGCT GGGCACATTC
AGCATCAGCT ACAATGATGA CCGCCGTTAC AACAGCCATT ATTACACGGC AGATTACTAT
CAAAATGTCT ACAGCGGTAC CTTTGGTTCG CTTGGCCTGC GGGCCGGTAT TCAGCGCTAT
AACAACGGCG ACAGCAACGC CAATACAGGA AAATATATCG CTCTCGATCT CTCGCTACCA
CTGGGCAACT GGTTTAGCGC AGGGATGACT CATCAAAACG GCTACACCAT GGCAAACCTG
TCAGCACGCA AACAGTTTGA TGAAGGAACC ATTCGCACTG TTGGTGCCAA TCTGTCACGT
GCCATCTCCG GCGATACCGG TGATGACAAA ACCCTCAGCG GCGGGGCGTA TGCACAATTC
GACGCTCGTT ACGCCAGCGG AACGCTGAAC GTCAATAGCG CGGCGGACGG CTACGTCAAT
ACCAACTTGA CCGCCAATGG CAGCGTCGGC TGGCAGGGTA AAAACATTGC TGCCAGCGGG
CGGACTGATG GCAACGCTGG GGTGATATTC AACACCGGGC TGGAGGACGA CGGTCAGATC
AGCGCCAAAA TCAACGGGCG GATTTTCCCG CTTAACGGCA AGCGTAACTA TCTCCCGCTC
TCTCCCTATG GAAGATATGA GGTGGAGTTA CAGAACAGCA AAAACTCACT CGACAGTTAC
GATATCGTCA GCGGCCGCAA AAGTCGTCTG ACTCTCTATC CAGGCAATGT CGCTGTCATT
GAGCCAGAGG TGAAGCAGAT GGTTACCGTC TCCGGTCGTA TCCGTGCGGA AGACGGCACA
CTGCTGGCTA ACGCACGGAT TAACAACCAT ATCGGCCGAA CCCGAACCGA TGAAAACGGC
GAGTTTGTCA TGGACGTGGA TAAGAAATAC CCCACTATCG ATTTTCGCTA CAGTGGCAAT
AAAACCTGCG AAGTGGCTCT GGAACTCAAC CAGGCGCGCG GTGCCGTCTG GGTCGGTGAT
GTGGTCTGCA GCGGCCTCTC ATCGTGGGCG GCGGTGACGC AGACAGGAGA AGAGAATGAG
AGTTAA
 
Protein sequence
MPLRRFSPGL KAQFAFGMVF LFVQPDASAA DISAQQIGGV IIPQAFSQAL QDGMSVPLYI 
HLAGSQGRQD DQRIGSAFIW LDDGQLRIRK IQLEESEDNA SVSEQTRQQL MALANAPFNE
ALTIPLTDNA QLDLSLRQLL LQLVVKREAL GTVLRSRSED IGQSSVNTLS SNLSYNLGVY
NNQLRNGGSN TSSYLSLNNV TALREHHVVL DGSLYGIGSG QQDSELYKAM YERDFAGHRF
AGGMLDTWNL QSLGPMTAIS AGKIYGLSWG NQASSTIFDS SQSATPVIAF LPAAGEVHLT
RDGRLLSVQN FTMGNHEVDT RGLPYGIYDV EVEVIVNGRV ISKRTQRVNK LFSRGRGVGA
PLAWQVWGGS FHMDRWSENG KKTRPAKESW LAGASTSGSL STLSWAATGY GYDNQAVGET
RLTLPLGGAI NVNLQNMLAS DSSWSSIGSI SATLPGGFSS LWVNQEKTRI GNQLRRSDAD
NRAIGGTLNL NSLWSKLGTF SISYNDDRRY NSHYYTADYY QNVYSGTFGS LGLRAGIQRY
NNGDSNANTG KYIALDLSLP LGNWFSAGMT HQNGYTMANL SARKQFDEGT IRTVGANLSR
AISGDTGDDK TLSGGAYAQF DARYASGTLN VNSAADGYVN TNLTANGSVG WQGKNIAASG
RTDGNAGVIF NTGLEDDGQI SAKINGRIFP LNGKRNYLPL SPYGRYEVEL QNSKNSLDSY
DIVSGRKSRL TLYPGNVAVI EPEVKQMVTV SGRIRAEDGT LLANARINNH IGRTRTDENG
EFVMDVDKKY PTIDFRYSGN KTCEVALELN QARGAVWVGD VVCSGLSSWA AVTQTGEENE
S