Gene EcDH1_3306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3306 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3555711 
End bp3556598 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content48% 
IMG OID 
Producthypothetical protein 
Protein accessionACX40930 
Protein GI260450508 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0152605 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACATT ATAAAACAGG TCATAAACAA CCACGATTTC GTTATTCAGT TCTGGCCCGC 
TGCGTGGCGT GGGCAAATAT CTCTGTTCAG GTTCTTTTTC CACTCGCTGT CACCTTTACC
CCAGTAATGG CGGCACGTGC GCAGCATGCG GTTCAGCCAC GGTTGAGCAT GGGAAATACT
ACGGTAACTG CTGATAATAA CGTGGAGAAA AATGTCGCGT CGTTTGCCGC AAATGCCGGG
ACATTTTTAA GCAGTCAGCC AGATAGCGAT GCGACACGTA ACTTTATTAC CGGAATGGCC
ACAGCTAAAG CTAACCAGGA AATACAGGAG TGGCTCGGGA AATATGGTAC TGCGCGCGTC
AAACTGAATG TCGATAAAGA TTTCTCGCTG AAGGATTCTT CGCTGGAAAT GCTTTATCCG
ATTTATGATA CGCCGACAAA TATGTTGTTC ACTCAGGGGG CAATACATCG TACAGACGAT
CGTACTCAGT CAAATATTGG TTTTGGCTGG CGTCATTTTT CAGGAAATGA CTGGATGGCG
GGGGTGAATA CTTTTATCGA TCATGATTTA TCCCGTAGTC ATACCCGCAT TGGTGTTGGT
GCGGAATACT GGCGCGATTA TCTGAAACTG AGCGCCAATG GTTATATTCG GGCTTCTGGC
TGGAAAAAAT CGCCGGATAT TGAGGATTAT CAGGAACGCC CGGCGAATGG CTGGGATATT
CGTGCTGAGG GCTATTTACC CGCCTGGCCG CAGCTTGGCG CAAGCCTGAT GTATGAACAG
TATTATGGCG ATGAAGTCGG GCTGTTTGGT AAAGATAAGC GCCAGAAAGA CCCGCATGCT
ATTTCTGCCG AGGTGACCTA TACGCCAGTG CCTCTTACCC AGCAATAG
 
Protein sequence
MSHYKTGHKQ PRFRYSVLAR CVAWANISVQ VLFPLAVTFT PVMAARAQHA VQPRLSMGNT 
TVTADNNVEK NVASFAANAG TFLSSQPDSD ATRNFITGMA TAKANQEIQE WLGKYGTARV
KLNVDKDFSL KDSSLEMLYP IYDTPTNMLF TQGAIHRTDD RTQSNIGFGW RHFSGNDWMA
GVNTFIDHDL SRSHTRIGVG AEYWRDYLKL SANGYIRASG WKKSPDIEDY QERPANGWDI
RAEGYLPAWP QLGASLMYEQ YYGDEVGLFG KDKRQKDPHA ISAEVTYTPV PLTQQ